Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 7980 associations (170 cell types, 4578 gene symbols, 27 tissues); Last updated: 15/04/2019 11:41:03 CET

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Description: A type of macrophage found in the pulmonary alveolus, near the pneumocytes, but separated from the wall. Activity of the alveolar macrophage is relatively high, because they are located at one of the major boundaries between the body and the outside world. They are responsible for removing particles such as dust or microorganisms from the respiratory surfaces.
Synonym(s): Dust cells

Gene expression markers for Alveolar macrophages

Vote(s) Species Official gene symbol UI Sensitivity Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs CSF2RB 0.017 0.018 2 Alveolar macrophages Mesoderm Lungs IL5RB,CD131,betaGMR,IL3RB colony stimulating factor 2 receptor beta common subunit Yflag
0
Mm Hs GAL 0.011 0 5 Alveolar macrophages Mesoderm Lungs GMAP,GAL-GMAP,GLNN,GALN galanin and GMAP prepropeptide Yflag
0
Mm CAR4 0.026 0.081 2 Alveolar macrophages Mesoderm Lungs carbonic anhydrase 4 flag
0
Mm EAR2 0.008 0.552 5 Alveolar macrophages Mesoderm Lungs eosinophil-associated, ribonuclease A family, member 2 flag
0
Mm Hs TLR2 0.012 0.181 7 Alveolar macrophages Mesoderm Lungs TIL4,CD282 toll like receptor 2 Yflag
0
Mm Hs GPNMB 0.013 0.138 4 Alveolar macrophages Mesoderm Lungs NMB,HGFIN glycoprotein nmb flag
0
Mm Hs MRC1 0.026 0.162 5 Alveolar macrophages Mesoderm Lungs CLEC13D,CD206,bA541I19.1,CLEC13DL,MRC1L1 mannose receptor C-type 1 flag
0
Mm LYZ1 0.021 0.11 4 Alveolar macrophages Mesoderm Lungs lysozyme 1 flag
0
Mm Hs MARCO 0.003 0.409 2 Alveolar macrophages Mesoderm Lungs SCARA2,SR-A6 macrophage receptor with collagenous structure flag
0
Mm Hs CD36 0.033 0.073 9 Alveolar macrophages Mesoderm Lungs SCARB3,GPIV,GP4,GP3B CD36 molecule Yflag
0
Mm Hs MPP1 0.04 0.035 1 Alveolar macrophages Mesoderm Lungs PEMP,DXS552E membrane palmitoylated protein 1 flag
0
Mm Hs TRIM25 0.022 0.102 1 Alveolar macrophages Mesoderm Lungs EFP,RNF147,ZNF147 tripartite motif containing 25 flag
0
Mm EAR1 0.003 0 2 Alveolar macrophages Mesoderm Lungs eosinophil-associated, ribonuclease A family, member 1 flag
0
Mm Hs OLR1 0.003 0.946 1 Alveolar macrophages Mesoderm Lungs LOX-1,SCARE1,CLEC8A oxidized low density lipoprotein receptor 1 Yflag
0
Mm Hs S100A4 0.092 0.007 9 Alveolar macrophages Mesoderm Lungs P9KA,18A2,PEL98,42A,CAPL S100 calcium binding protein A4 flag
0
Mm Hs GNGT2 0.043 0.066 2 Alveolar macrophages Mesoderm Lungs GNG9 G protein subunit gamma transducin 2 flag
0
Mm SIGLECF 0.002 0.194 4 Alveolar macrophages Mesoderm Lungs sialic acid binding Ig-like lectin F flag
0
Mm CHIL3 0.021 0.208 2 Alveolar macrophages Mesoderm Lungs chitinase-like 3 flag
0
Mm Hs TNFAIP2 0.027 0.151 2 Alveolar macrophages Mesoderm Lungs B94,EXOC3L3 TNF alpha induced protein 2 flag
0
Mm Hs ITGAX 0.006 0.456 8 Alveolar macrophages Mesoderm Lungs CD11c,CD11C integrin subunit alpha X flag
0
Mm BCL2A1B 0.034 0.086 1 Alveolar macrophages Mesoderm Lungs B cell leukemia/lymphoma 2 related protein A1b flag
0
Mm Hs CLEC7A 0.028 0.236 4 Alveolar macrophages Mesoderm Lungs dectin-1,hDectin-1,CD369,SCARE2,CLECSF12 C-type lectin domain containing 7A Yflag
0
Mm Hs GDA 0.035 0 2 Alveolar macrophages Mesoderm Lungs guanine deaminase flag
0
Mm BCL2A1D 0.022 0.15 1 Alveolar macrophages Mesoderm Lungs B cell leukemia/lymphoma 2 related protein A1d flag
0
Mm Hs KLHDC4 0.007 0.453 1 Alveolar macrophages Mesoderm Lungs DKFZp434G0522 kelch domain containing 4 flag
0
Mm Hs MCEMP1 0.018 0.218 2 Alveolar macrophages Mesoderm Lungs MGC132456,C19orf59 mast cell expressed membrane protein 1 flag
0
Mm Hs CXCL2 0.034 0.108 4 Alveolar macrophages Mesoderm Lungs SCYB2,GROb,MIP-2a,MGSA-b,CINC-2a,GRO2 C-X-C motif chemokine ligand 2 flag
0
Mm Hs G0S2 0.038 0.018 4 Alveolar macrophages Mesoderm Lungs G0/G1 switch 2 flag
0
Mm Hs CCL3 0.029 0.028 7 Alveolar macrophages Mesoderm Lungs G0S19-1,LD78ALPHA,MIP-1-alpha,SCYA3 C-C motif chemokine ligand 3 Yflag
0
Mm BGLAP3 0.002 0.207 1 Alveolar macrophages Mesoderm Lungs bone gamma-carboxyglutamate protein 3 flag
0
Mm WFDC21 0.021 0.194 1 Alveolar macrophages Mesoderm Lungs WAP four-disulfide core domain 21 flag
0
Mm Hs IL1B 0.02 0.07 5 Alveolar macrophages Mesoderm Lungs IL1F2,IL-1B,IL1-BETA interleukin 1 beta Yflag
0
Mm Hs PLET1 0.018 0 1 Alveolar macrophages Mesoderm Lungs C11orf34 placenta expressed transcript 1 flag

Datasets with computationally identified Alveolar macrophages

SRA SRS tissue cluster cell type p-value FDR View
SRA638923 SRS2797072 Lung 3 Alveolar macrophages 8.83E-10 3.50E-7 view data
SRA638923 SRS2797073 Lung 5 Alveolar macrophages 8.37E-11 2.37E-8 view data
SRA638923 SRS2797079 Lung 4 Alveolar macrophages 2.87E-14 1.46E-11 view data
SRA555753 SRS2135627 Neonatal mouse stomach explants 6 Alveolar macrophages 7.72E-15 1.75E-12 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 8.25E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.09E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.09E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.03E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.03E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.03E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.05E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.05E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.05E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.05E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.08E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 4.24E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 8.25E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 8.25E-18 view data
SRA611634 SRS2532205 Lung 1 Alveolar macrophages 3.23E-21 8.25E-18 view data
SRA611634 SRS2532205 Lung 5 Alveolar macrophages 8.66E-16 4.42E-13 view data
SRA611634 SRS2532205 Lung 5 Alveolar macrophages 8.66E-16 4.31E-13 view data
SRA611634 SRS2532206 Lung 1 Alveolar macrophages 5.79E-21 2.67E-18 view data
SRA611634 SRS2532207 Lung 10 Alveolar macrophages 1.18E-18 4.81E-16 view data
SRA611634 SRS2532208 Lung 2 Alveolar macrophages 6.60E-16 4.11E-13 view data
SRA611634 SRS2532209 Lung 2 Alveolar macrophages 7.36E-19 9.38E-16 view data
SRA611634 SRS2532210 Lung 8 Alveolar macrophages 1.53E-19 1.82E-16 view data
SRA739096 SRS3545826 Lung 0 Alveolar macrophages 2.79E-25 1.19E-22 view data
SRA739096 SRS3545826 Lung 1 Alveolar macrophages 2.72E-23 6.95E-21 view data
SRA739096 SRS3545826 Lung 2 Alveolar macrophages 1.73E-19 3.69E-17 view data
SRA739096 SRS3545826 Lung 3 Alveolar macrophages 6.84E-27 3.49E-24 view data
SRA739096 SRS3545826 Lung 4 Alveolar macrophages 8.53E-25 2.72E-22 view data
SRA739096 SRS3545826 Lung 5 Alveolar macrophages 4.29E-24 1.21E-21 view data
SRA739096 SRS3545826 Lung 6 Alveolar macrophages 1.36E-29 3.47E-26 view data
SRA739096 SRS3545826 Lung 7 Alveolar macrophages 5.08E-23 1.18E-20 view data
SRA739096 SRS3545826 Lung 8 Alveolar macrophages 5.05E-27 3.22E-24 view data
SRA739096 SRS3545826 Lung 9 Alveolar macrophages 1.96E-27 1.67E-24 view data
SRA739096 SRS3545826 Lung 10 Alveolar macrophages 4.24E-25 1.54E-22 view data
SRA739096 SRS3545826 Lung 11 Alveolar macrophages 1.28E-14 2.34E-12 view data
SRA739096 SRS3545826 Lung 12 Alveolar macrophages 4.92E-19 9.66E-17 view data
SRA739096 SRS3545826 Lung 13 Alveolar macrophages 4.23E-29 5.39E-26 view data
SRA739096 SRS3545827 Lung 0 Alveolar macrophages 1.31E-38 3.33E-35 view data
SRA739096 SRS3545827 Lung 1 Alveolar macrophages 1.30E-35 1.65E-32 view data
SRA739096 SRS3545827 Lung 2 Alveolar macrophages 3.20E-25 9.07E-23 view data
SRA739096 SRS3545827 Lung 3 Alveolar macrophages 1.42E-34 1.20E-31 view data
SRA739096 SRS3545827 Lung 4 Alveolar macrophages 1.59E-29 5.80E-27 view data
SRA739096 SRS3545827 Lung 5 Alveolar macrophages 1.03E-30 4.39E-28 view data
SRA739096 SRS3545827 Lung 7 Alveolar macrophages 8.60E-33 5.48E-30 view data
SRA739096 SRS3545827 Lung 8 Alveolar macrophages 2.22E-31 1.13E-28 view data
SRA739096 SRS3545827 Lung 9 Alveolar macrophages 4.46E-16 8.12E-14 view data
SRA739096 SRS3545827 Lung 10 Alveolar macrophages 2.30E-29 7.32E-27 view data
SRA739096 SRS3545827 Lung 11 Alveolar macrophages 5.27E-25 1.34E-22 view data
SRA739096 SRS3545827 Lung 13 Alveolar macrophages 1.04E-9 1.06E-7 view data
SRA728071 SRS3458842 Leukocytes from aortas 14 Alveolar macrophages 2.08E-6 1.68E-4 view data
SRA665588 SRS3034027 Lung 2 Alveolar macrophages 1.06E-6 2.40E-4 view data
SRA665588 SRS3034028 Lung 1 Alveolar macrophages 1.74E-5 4.13E-3 view data
SRA665588 SRS3034028 Lung 5 Alveolar macrophages 9.51E-11 5.66E-8 view data
SRA665588 SRS3034030 Lung 0 Alveolar macrophages 3.59E-7 1.46E-4 view data
SRA665588 SRS3034030 Lung 3 Alveolar macrophages 9.82E-15 1.00E-11 view data
SRA665588 SRS3034031 Lung 0 Alveolar macrophages 3.91E-16 4.66E-13 view data
SRA665588 SRS3034031 Lung 1 Alveolar macrophages 4.38E-9 2.60E-6 view data
SRA665588 SRS3034032 Lung 0 Alveolar macrophages 5.77E-17 5.89E-14 view data
SRA665588 SRS3034032 Lung 1 Alveolar macrophages 4.27E-16 2.18E-13 view data
SRA665588 SRS3034033 Lung 0 Alveolar macrophages 6.67E-7 2.27E-4 view data
SRA665588 SRS3034033 Lung 1 Alveolar macrophages 2.98E-11 3.04E-8 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.40E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.10E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.10E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.23E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.23E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.23E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.23E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.23E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.27E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.27E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.27E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.27E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.27E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.27E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.31E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.36E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.40E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.40E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.40E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.40E-9 view data
SRA665588 SRS3034034 Lung 0 Alveolar macrophages 1.09E-11 7.40E-9 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.59E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.36E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.36E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.46E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.46E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.46E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.53E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.59E-12 view data
SRA665588 SRS3034034 Lung 3 Alveolar macrophages 2.74E-15 5.59E-12 view data
SRA665588 SRS3034034 Lung 6 Alveolar macrophages 6.94E-14 7.08E-11 view data
SRA665588 SRS3034034 Lung 7 Alveolar macrophages 1.68E-10 8.56E-8 view data
SRA665588 SRS3034034 Lung 10 Alveolar macrophages 8.30E-6 1.06E-3 view data
SRA665588 SRS3034035 Lung 0 Alveolar macrophages 1.31E-13 1.22E-10 view data
SRA665588 SRS3034035 Lung 2 Alveolar macrophages 1.21E-16 2.25E-13 view data
SRA665588 SRS3034036 Lung 0 Alveolar macrophages 1.01E-19 1.46E-16 view data
SRA665588 SRS3034036 Lung 2 Alveolar macrophages 6.60E-10 3.69E-7 view data
SRA665588 SRS3034036 Lung 3 Alveolar macrophages 7.72E-18 7.44E-15 view data
SRA665588 SRS3034036 Lung 8 Alveolar macrophages 1.37E-9 5.27E-7 view data
SRA665588 SRS3034036 Lung 11 Alveolar macrophages 1.72E-8 4.52E-6 view data
SRA653146 SRS3044261 Lung 6 Alveolar macrophages 3.14E-24 2.00E-21 view data
SRA653146 SRS3044260 Lung 9 Alveolar macrophages 3.52E-4 3.87E-2 view data
SRA653146 SRS3044260 Lung 10 Alveolar macrophages 5.02E-22 2.35E-19 view data
SRA653146 SRS3044252 Lung 0 Alveolar macrophages 5.11E-26 3.69E-23 view data
SRA653146 SRS3044253 Lung 4 Alveolar macrophages 3.14E-27 2.24E-24 view data
SRA653146 SRS3044253 Lung 18 Alveolar macrophages 1.29E-22 6.60E-20 view data
SRA653146 SRS2874276 Lung 23 Alveolar macrophages 2.67E-20 6.68E-18 view data
SRA832392 SRS4237518 Lung 1 Alveolar macrophages 2.92E-4 3.10E-2 view data
SRA832392 SRS4237521 Lung 1 Alveolar macrophages 9.94E-9 2.25E-6 view data
SRA832392 SRS4237525 Lung 8 Alveolar macrophages 1.76E-8 4.98E-6 view data
SRA832392 SRS4237526 Lung 1 Alveolar macrophages 1.86E-10 9.49E-8 view data
SRA832392 SRS4237527 Lung 1 Alveolar macrophages 5.10E-7 6.74E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.40E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.38E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.38E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.38E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.39E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.40E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.40E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.40E-5 view data
SRA832392 SRS4237528 Lung 2 Alveolar macrophages 8.24E-8 1.40E-5 view data
SRA832392 SRS4237529 Lung 7 Alveolar macrophages 5.76E-10 1.57E-7 view data
SRA832392 SRS4237530 Lung 0 Alveolar macrophages 8.39E-10 2.28E-7 view data
SRA832392 SRS4237531 Lung 2 Alveolar macrophages 3.22E-4 2.11E-2 view data