Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 6742 associations (161 cell types, 4099 gene symbols, 29 tissues); Last updated: 22/03/2019 19:21:14 CET

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Description: Epithelial cells that line the bile ducts.

Gene expression markers for Cholangiocytes

Vote(s) Species Official gene symbol UI Sensitivity Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs GGT7 0.008 0 2 Cholangiocytes Endoderm Liver D20S101,dJ18C9.2,GGTL5,GGTL3 gamma-glutamyltransferase 7 flag
0
Mm Hs TFF2 0.002 0 3 Cholangiocytes Endoderm Liver SML1 trefoil factor 2 flag
0
Mm Hs MMP7 0.006 0 4 Cholangiocytes Endoderm Liver PUMP-1,MPSL1 matrix metallopeptidase 7 flag
0
Mm Hs CLDN4 0.035 0 4 Cholangiocytes Endoderm Liver CPE-R,WBSCR8,hCPE-R,CPETR,CPETR1 claudin 4 flag
0
Mm Hs EPCAM 0.106 0 1 Cholangiocytes Endoderm Liver Ly74,TROP1,GA733-2,EGP34,EGP40,EGP-2,KSA,CD326,Ep-CAM,HEA125,KS1/4,MK-1,MH99,MOC31,323/A3,17-1A,TACST-1,CO-17A,M4S1,MIC18,TACSTD1 epithelial cell adhesion molecule Yflag
0
Mm Hs SOX9 0.095 0 3 Cholangiocytes Endoderm Liver SRA1,CMD1,CMPD1 SRY-box 9 Yflag
0
Mm Hs TFF1 0.005 0 2 Cholangiocytes Endoderm Liver D21S21,pS2,pNR-2,HP1.A,BCEI trefoil factor 1 flag
0
Mm Hs TFF3 0.012 0 4 Cholangiocytes Endoderm Liver HITF,ITF trefoil factor 3 flag
0
Mm MUC3 0.007 0 4 Cholangiocytes Endoderm Liver mucin 3, intestinal flag
0
Mm Hs AGR2 0.016 0 6 Cholangiocytes Endoderm Liver XAG-2,HAG-2,PDIA17 anterior gradient 2, protein disulphide isomerase family member flag
0
Mm Hs ALB 0.01 0 4 Cholangiocytes Endoderm Liver albumin Yflag
0
Mm Hs HNF1B 0.004 0 3 Cholangiocytes Endoderm Liver LFB3,VHNF1,HNF1beta,MODY5,TCF2 HNF1 homeobox B Yflag
0
Mm Hs ALPL 0.008 0 3 Cholangiocytes Endoderm Liver TNSALP,TNALP,TNAP,HOPS alkaline phosphatase, liver/bone/kidney Yflag
0
Mm Hs ONECUT2 0.013 0 1 Cholangiocytes Endoderm Liver OC-2 one cut homeobox 2 flag
0
Mm Hs KRT19 0.075 0 3 Cholangiocytes Endoderm Liver K19,CK19,K1CS,MGC15366 keratin 19 flag
0
Mm Hs SSTR2 0.034 0 2 Cholangiocytes Endoderm Liver somatostatin receptor 2 flag
0
Mm Hs GPBAR1 0.001 0 1 Cholangiocytes Endoderm Liver BG37,TGR5,M-BAR,GPCR19,GPR131,MGC40597 G protein-coupled bile acid receptor 1 flag
0
Mm Hs JAG1 0.027 0 2 Cholangiocytes Endoderm Liver AHD,AWS,HJ1,CD339,AGS,JAGL1 jagged 1 Yflag
0
Mm Hs GGT1 0.007 0 3 Cholangiocytes Endoderm Liver D22S672,D22S732,CD224 gamma-glutamyltransferase 1 flag
0
Mm Hs PIGR 0.024 0 5 Cholangiocytes Endoderm Liver polymeric immunoglobulin receptor Yflag
0
Mm Hs AQP1 0.032 0 12 Cholangiocytes Endoderm Liver CHIP28,CO aquaporin 1 (Colton blood group) Yflag
0
Mm Hs AQP4 0.027 0 7 Cholangiocytes Endoderm Liver MIWC aquaporin 4 flag
0
Mm Hs CCKBR 0 0 1 Cholangiocytes Endoderm Liver cholecystokinin B receptor flag
0
Mm Hs CFTR 0.003 0 3 Cholangiocytes Endoderm Liver ABC35,TNR-CFTR,CFTR/MRP,CF,ABCC7 cystic fibrosis transmembrane conductance regulator Yflag
0
Mm Hs GGT6 0.002 0 1 Cholangiocytes Endoderm Liver FLJ90165 gamma-glutamyltransferase 6 flag
0
Mm Hs ITGB4 0.014 0 6 Cholangiocytes Endoderm Liver CD104 integrin subunit beta 4 Yflag
0
Mm Hs KCNN2 0.004 0 1 Cholangiocytes Endoderm Liver KCa2.2,hSK2 potassium calcium-activated channel subfamily N member 2 flag
0
Mm Hs KRT7 0.052 0 8 Cholangiocytes Endoderm Liver CK7,K2C7 keratin 7 flag
0
Mm Hs SCTR 0 0 1 Cholangiocytes Endoderm Liver secretin receptor flag
0
Mm Hs SLC4A2 0.006 0 2 Cholangiocytes Endoderm Liver HKB3,BND3L,NBND3,EPB3L1 solute carrier family 4 member 2 flag

Datasets with computationally identified Cholangiocytes

No data identified with this cell type.