Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 7014 associations (154 cell types, 4254 gene symbols, 28 tissues); Last updated: 19/02/2019 18:01:34 CET

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Gene expression markers for Undefined placental cells

Species Official gene symbol UI Sensitivity Marker count Cell type Germ layer Organ Aliases Product description Disease Action
Mm Hs H19 0.059 0.021 1 Undefined placental cells Trophoblast Placenta D11S813E,ASM1,NCRNA00008,LINC00008 H19, imprinted maternally expressed transcript Yflag
Mm Hs TFRC 0.05 0.009 4 Undefined placental cells Trophoblast Placenta CD71,TFR1,p90 transferrin receptor Yflag
Mm Hs DKKL1 0.024 0.047 3 Undefined placental cells Trophoblast Placenta SGY-1,CT34 dickkopf like acrosomal protein 1 flag
Mm Hs LAS1L 0.022 0.028 1 Undefined placental cells Trophoblast Placenta FLJ12525 LAS1 like, ribosome biogenesis factor flag
Mm Hs PHLDA2 0.021 0.185 2 Undefined placental cells Trophoblast Placenta IPL,BWR1C,HLDA2,TSSC3 pleckstrin homology like domain family A member 2 flag
Mm Hs DUSP9 0.013 0.11 1 Undefined placental cells Trophoblast Placenta MKP-4,MKP4 dual specificity phosphatase 9 flag
Mm Hs SCT 0.011 0 3 Undefined placental cells Trophoblast Placenta secretin flag
Mm Hs KRT23 0.01 0 3 Undefined placental cells Trophoblast Placenta K23,DKFZP434G032,HAIK1,CK23,MGC26158 keratin 23 flag
Mm RHOX5 0.009 0.136 1 Undefined placental cells Trophoblast Placenta reproductive homeobox 5 flag
Mm TEX19.1 0.007 0 2 Undefined placental cells Trophoblast Placenta testis expressed gene 19.1 flag
Mm Hs MBNL3 0.007 0.1 1 Undefined placental cells Trophoblast Placenta CHCR,FLJ11316,MBLX39,MBXL muscleblind like splicing regulator 3 flag
Mm Hs PRSS8 0.006 0.077 2 Undefined placental cells Trophoblast Placenta serine protease 8 flag
Mm Hs BATF3 0.006 0.075 3 Undefined placental cells Trophoblast Placenta JUNDM1,SNFT basic leucine zipper ATF-like transcription factor 3 flag
Mm RHOX6 0.004 0.299 1 Undefined placental cells Trophoblast Placenta reproductive homeobox 6 flag
Mm Hs LDOC1 0.004 0 1 Undefined placental cells Trophoblast Placenta Mar7,Mart7,SIRH7,RTL7,BCUR1 LDOC1, regulator of NFKB signaling flag
Mm RHOX9 0.002 0.513 1 Undefined placental cells Trophoblast Placenta reproductive homeobox 9 flag
Mm PRL3B1 0.001 0 1 Undefined placental cells Trophoblast Placenta prolactin family 3, subfamily b, member 1 flag
Mm FTHL17A 0.001 0 1 Undefined placental cells Trophoblast Placenta ferritin, heavy polypeptide-like 17, member A flag
Mm TPBPA 0.001 0 1 Undefined placental cells Trophoblast Placenta trophoblast specific protein alpha flag
Mm SERPINB9E 0 0 1 Undefined placental cells Trophoblast Placenta serine (or cysteine) peptidase inhibitor, clade B, member 9e flag
Mm SERPINB9G 0 0 1 Undefined placental cells Trophoblast Placenta serine (or cysteine) peptidase inhibitor, clade B, member 9g flag
Mm Hs DIO3 0 0 1 Undefined placental cells Trophoblast Placenta TXDI3 iodothyronine deiodinase 3 flag

Datasets with computationally identified Undefined placental cells

SRA SRS tissue cluster cell type p-value FDR View
SRA638923 SRS2797054 Embryo 8 Undefined placental cells 1.54E-8 2.14E-5 view data
SRA638923 SRS2797055 Embryo 2 Undefined placental cells 5.50E-5 2.97E-2 view data
SRA638923 SRS2797055 Embryo 4 Undefined placental cells 7.87E-6 8.48E-3 view data
SRA638923 SRS2797109 Placenta 3 Undefined placental cells 2.86E-6 1.54E-3 view data
SRA638923 SRS2797109 Placenta 5 Undefined placental cells 1.56E-15 1.68E-12 view data
SRA638923 SRS2797110 Placenta 0 Undefined placental cells 4.76E-12 1.76E-9 view data
SRA638923 SRS2797110 Placenta 1 Undefined placental cells 1.76E-13 1.08E-10 view data
SRA638923 SRS2797110 Placenta 2 Undefined placental cells 2.39E-16 2.21E-13 view data
SRA638923 SRS2797110 Placenta 3 Undefined placental cells 2.64E-26 4.88E-23 view data
SRA638923 SRS2797110 Placenta 4 Undefined placental cells 1.03E-7 2.71E-5 view data
SRA638923 SRS2797110 Placenta 9 Undefined placental cells 3.86E-13 1.79E-10 view data
SRA638923 SRS2797119 Trophoblast 10 Undefined placental cells 5.10E-8 9.43E-5 view data
SRA711739 SRS3344657 Embryonic fibroblasts 5 Undefined placental cells 1.37E-8 1.68E-5 view data
SRA711739 SRS3344657 Embryonic fibroblasts 6 Undefined placental cells 3.04E-11 7.50E-8 view data
SRA711739 SRS3344658 Embryonic fibroblasts 4 Undefined placental cells 1.51E-7 1.74E-4 view data
SRA711739 SRS3344658 Embryonic fibroblasts 6 Undefined placental cells 7.63E-16 1.76E-12 view data
SRA711739 SRS3344658 Embryonic fibroblasts 10 Undefined placental cells 1.99E-6 1.53E-3 view data
SRA711739 SRS3344660 Embryonic fibroblasts 6 Undefined placental cells 1.07E-7 1.31E-4 view data
SRA711739 SRS3344660 Embryonic fibroblasts 11 Undefined placental cells 1.74E-11 4.29E-8 view data
SRA711739 SRS3344660 Embryonic fibroblasts 13 Undefined placental cells 1.15E-5 7.10E-3 view data
SRA711739 SRS3344661 Embryonic fibroblasts 7 Undefined placental cells 3.61E-7 3.62E-4 view data
SRA711739 SRS3344662 Embryonic fibroblasts 12 Undefined placental cells 1.70E-12 3.66E-9 view data
SRA782908 SRS3815594 Placenta 2 Undefined placental cells 3.15E-6 1.45E-3 view data
SRA782908 SRS3815595 Placenta 1 Undefined placental cells 1.11E-4 3.43E-2 view data
SRA782908 SRS3815597 Placenta 11 Undefined placental cells 6.50E-5 2.88E-2 view data
SRA782908 SRS3815598 Placenta 3 Undefined placental cells 7.03E-5 1.81E-2 view data
SRA782908 SRS3815600 Placenta 13 Undefined placental cells 3.18E-6 3.43E-4 view data
SRA782908 SRS3815600 Placenta 15 Undefined placental cells 6.96E-5 4.69E-3 view data
SRA782908 SRS3815601 Placenta 1 Undefined placental cells 3.41E-5 1.05E-2 view data