Samples

This page shows the samples included in PanglaoDB. The database currently has 862 scRNA-seq dataset samples. The controls below can be used to filter by species and sequencing protocol.

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Status SRA SRS Tissue/Site Protocol Species No. Cells Action
SRA553822 SRS2119548 Cultured embryonic stem cells 10x chromium Homo sapiens 6501 view
SRA598936 SRS2428405 Kidney cortex 10x chromium Homo sapiens 3759 view
SRA608611 SRS2517316 Lung progenitors 10x chromium Homo sapiens 1077 view
SRA608611 SRS2517317 Lung progenitors 10x chromium Homo sapiens 906 view
SRA711898 SRS3349280 Tonsil 10x chromium Homo sapiens 3503 view
SRA605557 SRS2493625 Cd14+ monocytes 10x chromium Homo sapiens 411 view
SRA605557 SRS2493626 Cd14+ monocytes 10x chromium Homo sapiens 409 view
SRA678017 SRS3112005 Embryonic kidney cortex 10x chromium Homo sapiens 4231 view
SRA678017 SRS3112006 Embryonic kidney cortex 10x chromium Homo sapiens 3800 view
SRA695134 SRS3218229 Alveolar rhabdomyosarcoma 10x chromium Homo sapiens 8992 view
SRA550660 SRS2089635 Peripheral blood mononuclear cells 10x chromium Homo sapiens 1860 view
SRA550660 SRS2089636 Peripheral blood mononuclear cells 10x chromium Homo sapiens 1580 view
SRA550660 SRS2089637 Peripheral blood mononuclear cells 10x chromium Homo sapiens 10,292 view
SRA550660 SRS2089638 Peripheral blood mononuclear cells 10x chromium Homo sapiens 1818 view
SRA550660 SRS2089639 Peripheral blood mononuclear cells 10x chromium Homo sapiens 10,940 view
SRA646572 SRS2833946 Human embryo forebrain 10x chromium Homo sapiens 6943 view
SRA646572 SRS2833947 Human embryo forebrain 10x chromium Homo sapiens 4127 view
SRA650215 SRS2853842 Fetal kidney drop-seq Homo sapiens 1372 view
SRA650215 SRS2853843 Fetal kidney drop-seq Homo sapiens 789 view
SRA650215 SRS2857943 Fetal kidney drop-seq Homo sapiens 362 view
SRA628554 SRS2664364 Peripheral blood mononuclear cell 10x chromium Homo sapiens 3352 view
SRA628554 SRS2664365 Peripheral blood mononuclear cell 10x chromium Homo sapiens 3081 view
SRA608353 SRS2517519 Hepatocellular carcinoma 10x chromium Homo sapiens 1230 view
SRA608353 SRS2517521 Hepatocellular carcinoma 10x chromium Homo sapiens 2350 view
SRA721637 SRS3416994 B cells 10x chromium Homo sapiens 1663 view
SRA721637 SRS3416995 Lymph node 10x chromium Homo sapiens 2619 view
SRA640903 SRS2780388 Melanoma 10x chromium Homo sapiens 5091 view
SRA640903 SRS2780389 Melanoma 10x chromium Homo sapiens 4927 view
SRA652805 SRS2870733 Kidney organoids drop-seq Homo sapiens 2290 view
SRA652805 SRS2870734 Kidney organoids drop-seq Homo sapiens 2038 view
SRA652805 SRS2870735 Kidney organoids drop-seq Homo sapiens 1761 view
SRA652805 SRS2870743 Kidney organoids drop-seq Homo sapiens 1470 view
SRA700673 SRS3270097 Brain 10x chromium Homo sapiens 3704 view
SRA634975 SRS2724911 Ovarian tumor 10x chromium Homo sapiens 2547 view
SRA634975 SRS2724912 Ovarian tumor 10x chromium Homo sapiens 2139 view
SRA634975 SRS2724913 Ovarian tumor 10x chromium Homo sapiens 2262 view
SRA634975 SRS2724914 Ovarian tumor 10x chromium Homo sapiens 2094 view
SRA658915 SRS2944101 Tumor 10x chromium Homo sapiens 906 view
SRA635094 SRS2725546 Embryonic stem cell C1 Fluidigm Homo sapiens 7727 view
SRA658915 SRS2944102 Tumor 10x chromium Homo sapiens 1229 view
SRA658915 SRS2944103 Tumor 10x chromium Homo sapiens 865 view
SRA658915 SRS2944104 Tumor 10x chromium Homo sapiens 1031 view
SRA658915 SRS2944109 Tumor 10x chromium Homo sapiens 993 view
SRA658915 SRS2944110 Tumor 10x chromium Homo sapiens 939 view
SRA658915 SRS2944111 Tumor 10x chromium Homo sapiens 1197 view
SRA658915 SRS2944112 Tumor 10x chromium Homo sapiens 1242 view
SRA635094 SRS2725547 Embryoid body C1 Fluidigm Homo sapiens 2197 view
SRA635094 SRS2725548 Embryoid body C1 Fluidigm Homo sapiens 719 view
SRA635094 SRS2725549 Embryoid body C1 Fluidigm Homo sapiens 2618 view
SRA635094 SRS2725550 Embryonic stem cell C1 Fluidigm Homo sapiens 1443 view
SRA635094 SRS2725551 Embryoid body C1 Fluidigm Homo sapiens 1032 view
SRA635094 SRS2725552 Embryonic stem cell C1 Fluidigm Homo sapiens 4941 view
SRA635094 SRS2725553 Embryonic stem cell C1 Fluidigm Homo sapiens 4140 view
SRA635094 SRS2976475 Embryoid body C1 Fluidigm Homo sapiens 3166 view
SRA635094 SRS2976476 Embryonic stem cell C1 Fluidigm Homo sapiens 652 view
SRA635094 SRS2976477 Embryonic stem cell C1 Fluidigm Homo sapiens 532 view
SRA594999 SRS2397417 Umbilical vein endothelial cells 10x chromium Homo sapiens 9057 view
SRA594999 SRS2397418 Umbilical vein endothelial cells 10x chromium Homo sapiens 5929 view
SRA617020 SRS2566664 B cells 10x chromium Homo sapiens 271 view
SRA617020 SRS2566665 B cells 10x chromium Homo sapiens 289 view
SRA621638 SRS2610283 Bone marrow 10x chromium Homo sapiens 1196 view
SRA621638 SRS2610285 Bone marrow 10x chromium Homo sapiens 835 view
SRA691388 SRS3173555 Breast epithelium 10x chromium Homo sapiens 4405 view
SRA691388 SRS3173556 Breast epithelium 10x chromium Homo sapiens 8329 view
SRA691388 SRS3173557 Breast epithelium 10x chromium Homo sapiens 7397 view
SRA691388 SRS3173558 Breast epithelium 10x chromium Homo sapiens 9196 view
SRA710104 SRS3334253 Adipose 10x chromium Homo sapiens 9399 view
SRA710104 SRS3334254 Adipose 10x chromium Homo sapiens 9107 view
SRA710104 SRS3334255 Adipose 10x chromium Homo sapiens 9510 view
SRA275902 nSRS=648 Tonsil Smart-seq2 Homo sapiens 648 view
SRA426370 nSRS=1608 Neuronal epithelium C1 Fluidigm Homo sapiens 1543 view
SRA559821 nSRS=546 Retina C1 Fluidigm Homo sapiens 546 view
SRA628550 nSRS=2244 Peripheral blood mononuclear cells Smart-seq2 Homo sapiens 2243 view
SRA732346 SRS3496836 Endothelial cells 10x chromium Homo sapiens 3406 view
SRA732346 SRS3496838 Endothelial cells 10x chromium Homo sapiens 3683 view
SRA713577 SRS3363004 Peripheral blood mononuclear cells 10x chromium Homo sapiens 3334 view
SRA704181 SRS3305829 Breast cancer cell line 10x chromium Homo sapiens 3899 view
SRA704181 SRS3305830 Breast cancer cell line 10x chromium Homo sapiens 4098 view
SRA704181 SRS3305831 Breast cancer cell line 10x chromium Homo sapiens 6256 view
SRA704181 SRS3305832 Breast cancer cell line 10x chromium Homo sapiens 4935 view
SRA701877 SRS3279684 Pancreatic islets 10x chromium Homo sapiens 2052 view
SRA701877 SRS3279685 Pancreatic islets 10x chromium Homo sapiens 1123 view
SRA701877 SRS3279686 Pancreatic islets 10x chromium Homo sapiens 1805 view
SRA701877 SRS3279687 Pancreatic islets 10x chromium Homo sapiens 2416 view
SRA701877 SRS3279688 Pancreatic islets 10x chromium Homo sapiens 442 view
SRA701877 SRS3279689 Pancreatic islets 10x chromium Homo sapiens 1245 view
SRA701877 SRS3279690 Pancreatic islets 10x chromium Homo sapiens 2492 view
SRA701877 SRS3279691 Pancreatic islets 10x chromium Homo sapiens 1794 view
SRA701877 SRS3279692 Pancreatic islets 10x chromium Homo sapiens 2884 view
SRA701877 SRS3279693 Pancreatic islets 10x chromium Homo sapiens 2953 view
SRA701877 SRS3279694 Pancreatic islets 10x chromium Homo sapiens 2499 view
SRA701877 SRS3279695 Pancreatic islets 10x chromium Homo sapiens 3508 view
SRA636225 SRS2737286 Circulating tumor cells in hepatocellular carcinoma 10x chromium Homo sapiens 6814 view
SRA636225 SRS2737287 Circulating tumor cells in hepatocellular carcinoma 10x chromium Homo sapiens 3558 view
SRA640325 SRS2769050 Lung distal alveolar stromal cells 10x chromium Homo sapiens 11,530 view
SRA640325 SRS2769051 Lung proximal airway stromal cells 10x chromium Homo sapiens 11,186 view
SRA716153 SRS3384792 CD34+ cord blood cells 10x chromium Homo sapiens 2371 view
SRA716153 SRS3384793 CD34+ cord blood cells 10x chromium Homo sapiens 1976 view
SRA716153 SRS3384795 CD34+ cord blood cells 10x chromium Homo sapiens 3306 view
SRA719952 SRS3407249 NK cells 10x chromium Homo sapiens 22,589 view
SRA322626 nSRS=2289 Bone marrow Smart-seq2 Homo sapiens 865 view
SRA691149 nSRS=246 Mammary epithelium C1 Fluidigm Homo sapiens 218 view
SRA605365 SRS2492922 Nasal airway epithelium 10x chromium Homo sapiens 1932 view
SRA688526 SRS3164178 Cortical organoids 10x chromium Homo sapiens 2306 view
SRA688526 SRS3164179 Cortical organoids 10x chromium Homo sapiens 2329 view
SRA729910 SRS3474726 Lung airway epithelial cells 10x chromium Homo sapiens 4319 view
SRA729910 SRS3474727 Lung airway epithelial cells 10x chromium Homo sapiens 4597 view
SRA769176 SRS3747746 T cells 10x chromium Homo sapiens 1170 view
SRA769176 SRS3747747 T cells 10x chromium Homo sapiens 1647 view
SRA769176 SRS3747748 T cells 10x chromium Homo sapiens 764 view
SRA703206 SRS3296611 Colon 10x chromium Homo sapiens 4826 view
SRA703206 SRS3296612 Colon 10x chromium Homo sapiens 6476 view
SRA703206 SRS3296613 Colon (Ulcerative Colitis) 10x chromium Homo sapiens 3497 view
SRA703206 SRS3296614 Colon (Ulcerative Colitis) 10x chromium Homo sapiens 4651 view
SRA760933 SRS3693061 Hepatocyte-derived liver progenitor-like cells 10x chromium Homo sapiens 8030 view
SRA749327 SRS3693908 Merkel Cell Carcinoma 10x chromium Homo sapiens 2532 view
SRA749327 SRS3693909 Merkel Cell Carcinoma 10x chromium Homo sapiens 5627 view
SRA749327 SRS3693910 PBMC 10x chromium Homo sapiens 1929 view
SRA749327 SRS3693911 PBMC 10x chromium Homo sapiens 1536 view
SRA749327 SRS3693912 PBMC 10x chromium Homo sapiens 1352 view
SRA749327 SRS3693913 PBMC 10x chromium Homo sapiens 3744 view
SRA768499 SRS3744979 NK cells from spleen 10x chromium Homo sapiens 1229 view
SRA768499 SRS3744980 NK cells from spleen 10x chromium Homo sapiens 1200 view
SRA768499 SRS3744981 NK cells from blood 10x chromium Homo sapiens 1401 view
SRA768499 SRS3744982 NK cells from blood 10x chromium Homo sapiens 1211 view
SRA768499 SRS3744983 NK cells from blood 10x chromium Homo sapiens 1612 view
SRA768499 SRS3744990 NK cells from spleen 10x chromium Homo sapiens 1683 view
SRA740174 SRS3548780 Bone marrow 10x chromium Homo sapiens 665 view
SRA740174 SRS3548781 Bone marrow 10x chromium Homo sapiens 1059 view
SRA740174 SRS3548782 Bone marrow 10x chromium Homo sapiens 681 view
SRA740174 SRS3548783 Bone marrow 10x chromium Homo sapiens 1035 view
SRA779509 SRS3805245 Bone marrow 10x chromium Homo sapiens 6248 view
SRA779509 SRS3805246 Bone marrow 10x chromium Homo sapiens 6024 view
SRA779509 SRS3805247 Bone marrow 10x chromium Homo sapiens 7623 view
SRA779509 SRS3805248 Bone marrow 10x chromium Homo sapiens 6395 view
SRA779509 SRS3805249 Bone marrow 10x chromium Homo sapiens 1133 view
SRA779509 SRS3805250 Bone marrow 10x chromium Homo sapiens 5208 view
SRA779509 SRS3805251 Bone marrow 10x chromium Homo sapiens 5345 view
SRA779509 SRS3805252 Bone marrow 10x chromium Homo sapiens 5540 view
SRA779509 SRS3805253 Bone marrow 10x chromium Homo sapiens 5203 view
SRA779509 SRS3805254 Bone marrow 10x chromium Homo sapiens 5500 view
SRA779509 SRS3805255 Bone marrow 10x chromium Homo sapiens 7559 view
SRA779509 SRS3805256 Bone marrow 10x chromium Homo sapiens 4958 view
SRA779509 SRS3805257 Bone marrow 10x chromium Homo sapiens 5496 view
SRA779509 SRS3805258 Bone marrow 10x chromium Homo sapiens 5683 view
SRA779509 SRS3805259 Bone marrow 10x chromium Homo sapiens 6032 view
SRA779509 SRS3805260 Bone marrow 10x chromium Homo sapiens 3987 view
SRA779509 SRS3805261 Bone marrow 10x chromium Homo sapiens 1829 view
SRA779509 SRS3805262 Bone marrow 10x chromium Homo sapiens 6431 view
SRA779509 SRS3805263 Bone marrow 10x chromium Homo sapiens 6052 view
SRA779509 SRS3805264 Bone marrow 10x chromium Homo sapiens 992 view
SRA779509 SRS3805265 Bone marrow 10x chromium Homo sapiens 5735 view
SRA779509 SRS3805266 Bone marrow 10x chromium Homo sapiens 6210 view
SRA779509 SRS3805267 Bone marrow 10x chromium Homo sapiens 3966 view
SRA779509 SRS3805268 Bone marrow 10x chromium Homo sapiens 5603 view
SRA779509 SRS3805269 Bone marrow 10x chromium Homo sapiens 5934 view
SRA660949 SRS2990317 Umbilical cord blood 10x chromium Homo sapiens 1284 view
SRA660949 SRS2990318 Umbilical cord blood 10x chromium Homo sapiens 4955 view
SRA795539 SRS3947512 10x chromium Homo sapiens 2569 view
SRA795539 SRS3947513 10x chromium Homo sapiens 3487 view