Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: A naive B cell is a B cell that has not been exposed to an antigen.

Gene expression markers for B cells naive

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
10
Mm Hs P2RX5 0 0 0 0.002 0 5 B cells naive Mesoderm Immune system P2X5 purinergic receptor P2X 5 flag
0
Mm Hs SIK1 0.029 0 0 0 0 3 B cells naive Mesoderm Immune system msk,SNF1LK salt inducible kinase 1 Yflag
0
Mm Hs SLC12A1 0.001 0 0 0.001 0 3 B cells naive Mesoderm Immune system NKCC2 solute carrier family 12 member 1 Yflag
0
Mm Hs SELL 0.035 0.533 0 0.058 0 6 B cells naive Mesoderm Immune system LSEL,LAM1,LAM-1,hLHRc,Leu-8,Lyam-1,PLNHR,CD62L,LYAM1,LNHR selectin L flag
0
Mm Hs RASGRP2 0.066 0.067 0 0.024 0 3 B cells naive Mesoderm Immune system CALDAG-GEFI RAS guanyl releasing protein 2 Yflag
0
Mm Hs RALGPS2 0.048 0 0 0.023 0 4 B cells naive Mesoderm Immune system FLJ10244,FLJ25604 Ral GEF with PH domain and SH3 binding motif 2 flag
0
Mm Hs PTPRCAP 0.072 0 0 0 0.087 4 B cells naive Mesoderm Immune system CD45-AP protein tyrosine phosphatase, receptor type C associated protein flag
0
Hs PSG2 0 0 0 0 0 1 B cells naive Mesoderm Immune system PSGGB,PSG1,PSBG2 pregnancy specific beta-1-glycoprotein 2 flag
0
Mm Hs PNOC 0.009 0 0 0.001 0.01 5 B cells naive Mesoderm Immune system PPNOC,N/OFQ,NOP prepronociceptin flag
0
Mm Hs P2RY14 0.012 0 0 0.003 0.014 3 B cells naive Mesoderm Immune system KIAA0001,GPR105 purinergic receptor P2Y14 flag
0
Mm Hs NMBR 0 0 0 0 0 2 B cells naive Mesoderm Immune system BB1R neuromedin B receptor flag
0
Mm Hs MS4A1 0.014 1 0 0.016 0.012 4 B cells naive Mesoderm Immune system Bp35,MS4A2,CD20 membrane spanning 4-domains A1 Yflag
0
Mm Hs MICAL3 0.02 0 0 0.01 0.022 1 B cells naive Mesoderm Immune system KIAA0819 microtubule associated monooxygenase, calponin and LIM domain containing 3 flag
0
Mm Hs MEP1A 0.004 0 0 0.001 0.006 2 B cells naive Mesoderm Immune system PPHA meprin A subunit alpha flag
0
Mm Hs LY86 0.07 0.2 0 0.026 0.078 2 B cells naive Mesoderm Immune system MD-1,dJ80N2.1 lymphocyte antigen 86 flag
0
Mm Hs LTB 0.065 1 0 0.159 0.045 5 B cells naive Mesoderm Immune system TNFSF3,TNFC lymphotoxin beta flag
0
Mm Hs IRF8 0.069 0.2 0 0.026 0.075 4 B cells naive Mesoderm Immune system IRF-8,ICSBP,ICSBP1 interferon regulatory factor 8 Yflag
0
Hs IL4R 0.002 0.4 0 0.008 0 4 B cells naive Mesoderm Immune system CD124 interleukin 4 receptor Yflag
0
Mm Hs FOXP1 0.174 0.8 0 0.23 0.162 1 B cells naive Mesoderm Immune system QRF1,12CC4,HSPC215,hFKH1B forkhead box P1 Yflag
0
Mm Hs CD74 0.169 1 0 0.361 0.125 5 B cells naive Mesoderm Immune system DHLAG CD74 molecule flag
0
Mm Hs BIRC3 0.026 0.533 0 0.081 0.015 2 B cells naive Mesoderm Immune system cIAP2,hiap-1,MIHC,RNF49,MALT2,c-IAP2,API2 baculoviral IAP repeat containing 3 flag
0
Mm Hs STAG3 0.006 0.067 0 0.018 0 1 B cells naive Mesoderm Immune system stromal antigen 3 Yflag
0
Hs LINC00926 0.003 0.933 0 0.011 0 1 B cells naive Mesoderm Immune system long intergenic non-protein coding RNA 926 flag
0
Mm Hs TNFRSF13C 0.008 0.933 0 0.015 0 2 B cells naive Mesoderm Immune system BAFFR,CD268 TNF receptor superfamily member 13C Yflag
0
Hs HLA-DQB1 0.012 0.867 0 0.061 0 3 B cells naive Mesoderm Immune system HLA-DQB major histocompatibility complex, class II, DQ beta 1 Yflag
0
Mm Hs CD52 0.181 1 0 0.274 0.16 3 B cells naive Mesoderm Immune system HE5,EDDM5,CDW52 CD52 molecule flag
0
Mm Hs MITF 0.004 0 0 0.006 0.003 5 B cells naive Mesoderm Immune system MI,bHLHe32,WS2A,WS2 melanogenesis associated transcription factor Yflag
0
Hs IGLL3P 0 0 0 0 0 3 B cells naive Mesoderm Immune system 16.1,IGLL3 immunoglobulin lambda like polypeptide 3, pseudogene flag
0
Mm Hs TNFSF8 0.001 0 0 0 0 1 B cells naive Mesoderm Immune system CD153,CD30LG TNF superfamily member 8 flag
0
Hs ZNF286A 0 0 0 0.001 0 1 B cells naive Mesoderm Immune system KIAA1874,ZNF286 zinc finger protein 286A flag
0
Mm Hs VPREB3 0.011 0.533 0 0.014 0 3 B cells naive Mesoderm Immune system 8HS20 V-set pre-B cell surrogate light chain 3 flag
0
Mm Hs UGT1A8 0 0 0 0 0 1 B cells naive Mesoderm Immune system UGT1H UDP glucuronosyltransferase family 1 member A8 flag
0
Hs TCL1A 0.003 0.733 0 0.012 0 1 B cells naive Mesoderm Immune system TCL1 T cell leukemia/lymphoma 1A flag
0
Mm Hs STAP1 0.004 0 0 0.003 0 2 B cells naive Mesoderm Immune system STAP-1,BRDG1 signal transducing adaptor family member 1 Yflag
0
Mm Hs SPIB 0.01 0 0 0.009 0 5 B cells naive Mesoderm Immune system SPI-B Spi-B transcription factor flag
0
Mm Hs BANK1 0.006 0.533 0 0.006 0.005 3 B cells naive Mesoderm Immune system BANK,FLJ20706 B cell scaffold protein with ankyrin repeats 1 flag
0
Mm Hs CD37 0.116 1 0 0.212 0.095 3 B cells naive Mesoderm Immune system TSPAN26 CD37 molecule flag
0
Mm Hs CD22 0.003 0.067 0 0.003 0.002 4 B cells naive Mesoderm Immune system SIGLEC-2,SIGLEC2 CD22 molecule flag
0
Hs CD1C 0.001 0 0 0.005 0 3 B cells naive Mesoderm Immune system CD1c molecule flag
0
Mm Hs CD180 0.012 0 0 0.001 0.014 5 B cells naive Mesoderm Immune system RP105,Ly78,LY64 CD180 molecule flag
0
Mm Hs BRAF 0.025 0 0 0.016 0.028 3 B cells naive Mesoderm Immune system BRAF1 B-Raf proto-oncogene, serine/threonine kinase Yflag
0
Mm Hs BLK 0.005 0.067 0 0.002 0.004 2 B cells naive Mesoderm Immune system MGC10442 BLK proto-oncogene, Src family tyrosine kinase Yflag
0
Mm Hs BEND5 0.007 0 0 0.002 0.008 1 B cells naive Mesoderm Immune system FLJ11588,C1orf165 BEN domain containing 5 flag
0
Mm Hs BCL7A 0.078 0 0 0.014 0.095 1 B cells naive Mesoderm Immune system BCL7 BCL tumor suppressor 7A flag
0
Mm Hs CD69 0.024 0.667 0 0.109 0.007 11 B cells naive Mesoderm Immune system CLEC2C CD69 molecule flag
0
Mm Hs BACH2 0.003 0 0 0.002 0.004 3 B cells naive Mesoderm Immune system BTBD25 BTB domain and CNC homolog 2 flag
0
Mm Hs ADAM28 0.004 0.333 0 0.016 0.001 2 B cells naive Mesoderm Immune system eMDCII,MDC-Lm,MDC-Ls,ADAM23 ADAM metallopeptidase domain 28 flag
0
Mm Hs ABCB4 0.002 0 0 0 0.003 1 B cells naive Mesoderm Immune system MDR2,PFIC-3,GBD1,PGY3,MDR3 ATP binding cassette subfamily B member 4 Yflag
0
Mm Hs MME 0.017 0 0 0.027 0.015 5 B cells naive Mesoderm Immune system CALLA,CD10 membrane metalloendopeptidase Yflag
0
Mm Hs IL2RA 0.009 0 0 0.02 0.007 6 B cells naive Mesoderm Immune system IL2R,IDDM10 interleukin 2 receptor subunit alpha Yflag
0
Mm Hs CD72 0.003 0 0 0.002 0.003 3 B cells naive Mesoderm Immune system LYB2,CD72b CD72 molecule flag
0
Mm Hs CD2 0.04 0 0 0.094 0.03 9 B cells naive Mesoderm Immune system CD2 molecule flag
0
Hs FCRL2 0 0 0 0 0 3 B cells naive Mesoderm Immune system FCRH2,IRTA4,CD307b,SPAP1 Fc receptor like 2 flag
0
Mm Hs IGKC 0.072 1 0 0.159 0.054 4 B cells naive Mesoderm Immune system HCAK1 immunoglobulin kappa constant Yflag
0
Mm Hs IGHM 0.078 1 0 0.051 0.083 4 B cells naive Mesoderm Immune system immunoglobulin heavy constant mu Yflag
0
Mm Hs IGHD 0.008 0.867 0 0.005 0.008 4 B cells naive Mesoderm Immune system FLJ00382,FLJ46727,MGC29633 immunoglobulin heavy constant delta flag
0
Hs HLA-DOB 0.001 0 0 0.005 0 3 B cells naive Mesoderm Immune system major histocompatibility complex, class II, DO beta flag
0
Mm Hs HHEX 0.037 0 0 0.023 0.04 8 B cells naive Mesoderm Immune system HEX,HOX11L-PEN,PRHX hematopoietically expressed homeobox flag
0
Hs GUSBP11 0 0 0 0 0 3 B cells naive Mesoderm Immune system glucuronidase, beta pseudogene 11 flag
0
Hs GPR18 0.001 0 0 0.007 0 2 B cells naive Mesoderm Immune system G protein-coupled receptor 18 flag
0
Mm Hs FRK 0.005 0 0 0.007 0.004 2 B cells naive Mesoderm Immune system RAK,PTK5 fyn related Src family tyrosine kinase flag
0
Mm Hs CD19 0.007 0 0 0.008 0.006 5 B cells naive Mesoderm Immune system CD19 molecule Yflag
0
Mm Hs FCGR2B 0.031 0 0 0.005 0.036 5 B cells naive Mesoderm Immune system CD32B Fc fragment of IgG receptor IIb Yflag
0
Hs FCER2 0.002 0.4 0 0 0 4 B cells naive Mesoderm Immune system CLEC4J,CD23,CD23A,FCE2 Fc fragment of IgE receptor II flag
0
Mm Hs EAF2 0.009 0.133 0 0.03 0.003 3 B cells naive Mesoderm Immune system BM040,TRAITS ELL associated factor 2 flag
0
Mm Hs CXCR5 0.001 0 0 0 0.001 4 B cells naive Mesoderm Immune system MDR15,CD185,BLR1 C-X-C motif chemokine receptor 5 flag
0
Mm Hs CR2 0.001 0 0 0.001 0.001 4 B cells naive Mesoderm Immune system CD21,C3DR complement C3d receptor 2 Yflag
0
Mm Hs CD79B 0.028 1 0 0.038 0.024 3 B cells naive Mesoderm Immune system IGB CD79b molecule Yflag
0
Mm Hs CD79A 0.024 0.933 0 0.039 0.018 4 B cells naive Mesoderm Immune system MB-1,IGA CD79a molecule Yflag

Datasets with computationally identified B cells naive

SRA SRS tissue cluster cell type p-value FDR View
SRA713577 SRS3363004 Peripheral blood mononuclear cells 8 B cells naive 1.47E-17 1.11E-14 view data
SRA779509 SRS3805247 Bone marrow 1 B cells naive 1.55E-7 3.33E-5 view data
SRA779509 SRS3805268 Bone marrow 3 B cells naive 5.99E-14 2.59E-11 view data
SRA716608 SRS3391632 Liver 17 B cells naive 3.36E-9 5.38E-7 view data
SRA617020 SRS2566665 B cells 2 B cells naive 7.25E-12 1.60E-9 view data
SRA749327 SRS3693912 PBMC 4 B cells naive 1.85E-5 5.45E-3 view data
SRA779509 SRS3805246 Bone marrow 4 B cells naive 2.43E-8 8.96E-6 view data
SRA749327 SRS3693911 PBMC 8 B cells naive 4.99E-13 1.69E-10 view data
SRA617020 SRS2566664 B cells 1 B cells naive 2.03E-13 9.98E-11 view data
SRA617020 SRS2566664 B cells 2 B cells naive 3.58E-7 5.87E-5 view data
SRA779509 SRS3805262 Bone marrow 5 B cells naive 6.63E-16 2.87E-13 view data
SRA779509 SRS3805265 Bone marrow 2 B cells naive 7.30E-7 9.34E-5 view data
SRA779509 SRS3805248 Bone marrow 1 B cells naive 4.10E-10 1.19E-7 view data
SRA749327 SRS3693910 PBMC 1 B cells naive 5.37E-11 9.13E-9 view data
SRA779509 SRS3805249 Bone marrow 2 B cells naive 3.07E-6 6.42E-4 view data