Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: Delta cells secrete the hormone somatostatin, which is also produced by a number of other endocrine cells in the body.

Gene expression markers for Delta cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
2
Mm Hs SST 0.027 1 0 0.045 0 5 Delta cells Endoderm Pancreas SMST somatostatin flag
1
Mm Hs GABRB3 0.025 0.125 0.2 0.004 0.03 1 Delta cells Endoderm Pancreas gamma-aminobutyric acid type A receptor beta3 subunit Yflag
1
Mm Hs FRZB 0.012 0.125 0.8 0.03 0.007 4 Delta cells Endoderm Pancreas FRZB-PEN,FRZB1,SRFP3,FRP-3,SFRP3,FRE,FRITZ,FRZB-1,FZRB,hFIZ frizzled related protein Yflag
0
Hs MS4A8 0.001 0 0 0.004 0 1 Delta cells Endoderm Pancreas CD20L5,MS4A8B membrane spanning 4-domains A8 flag
0
Mm Hs BAIAP3 0.003 0 0.1 0 0.004 1 Delta cells Endoderm Pancreas BAP3,KIAA0734 BAI1 associated protein 3 flag
0
Mm Hs CASR 0.001 0 0.1 0.002 0 4 Delta cells Endoderm Pancreas FHH,NSHPT,GPRC2A,HHC,HHC1 calcium sensing receptor Yflag
0
Mm Hs BCHE 0.003 0 0 0.005 0.002 3 Delta cells Endoderm Pancreas CHE2 butyrylcholinesterase flag
0
Mm Hs UNC5B 0.002 0 0 0 0 1 Delta cells Endoderm Pancreas UNC5H2,p53RDL1 unc-5 netrin receptor B flag
0
Mm Hs EDN3 0.003 0.125 0 0.002 0.004 2 Delta cells Endoderm Pancreas ET3 endothelin 3 Yflag
0
Mm Hs PRG4 0.004 0 0 0.002 0.004 4 Delta cells Endoderm Pancreas JCAP,SZP,HAPO,bG174L6.2,FLJ32635,CACP proteoglycan 4 Yflag
0
Mm Hs GHSR 0 0 0 0 0 3 Delta cells Endoderm Pancreas growth hormone secretagogue receptor Yflag
0
Mm Hs PCSK1 0.008 0.75 0.4 0.008 0.008 5 Delta cells Endoderm Pancreas PC1,NEC1 proprotein convertase subtilisin/kexin type 1 Yflag
0
Mm Hs GABRG2 0.024 0 0 0.001 0.03 3 Delta cells Endoderm Pancreas gamma-aminobutyric acid type A receptor gamma2 subunit Yflag
0
Mm Hs POU3F1 0.013 0 0 0 0.017 4 Delta cells Endoderm Pancreas OCT6,SCIP,OTF6 POU class 3 homeobox 1 flag
0
Mm Hs BHLHE41 0.031 0 0.1 0.008 0.037 1 Delta cells Endoderm Pancreas DEC2,SHARP-1,SHARP1,bHLHe41,BHLHB3 basic helix-loop-helix family member e41 Yflag
0
Mm Hs EHF 0.024 0 0.4 0.052 0.019 5 Delta cells Endoderm Pancreas ESE3,ESEJ ETS homologous factor flag
0
Mm Hs LCORL 0.015 0 0 0.011 0.016 1 Delta cells Endoderm Pancreas MLR1,FLJ30696 ligand dependent nuclear receptor corepressor like flag
0
Mm Hs ETV1 0.037 0.125 0.8 0.008 0.045 3 Delta cells Endoderm Pancreas ER81 ETS variant 1 flag
0
Mm Hs PDX1 0.005 0.125 0.7 0.006 0.004 4 Delta cells Endoderm Pancreas IDX-1,STF-1,PDX-1,MODY4,IPF1 pancreatic and duodenal homeobox 1 Yflag
0
Mm Hs LEPR 0.005 0 0 0.008 0.004 3 Delta cells Endoderm Pancreas OBR,CD295 leptin receptor Yflag
0
Mm Hs UCP2 0.013 0.125 0 0.005 0 8 Delta cells Endoderm Pancreas SLC25A8,BMIQ4 uncoupling protein 2 Yflag
0
Hs GPC5-AS1 0.001 0.5 0 0.003 0 2 Delta cells Endoderm Pancreas GPC5 antisense RNA 1 flag
0
Mm Hs NPTX2 0.008 0 0 0.018 0.007 2 Delta cells Endoderm Pancreas neuronal pentraxin 2 flag
0
Mm Hs FXYD2 0.025 0 0 0.004 0.031 6 Delta cells Endoderm Pancreas MGC12372,ATP1G1,HOMG2 FXYD domain containing ion transport regulator 2 Yflag
0
Mm Hs IAPP 0.023 0.75 1 0.04 0.02 3 Delta cells Endoderm Pancreas AMYLIN islet amyloid polypeptide flag
0
Mm Hs KCNK16 0.007 0.125 1 0.008 0.006 2 Delta cells Endoderm Pancreas K2p16.1,TALK-1,TALK1 potassium two pore domain channel subfamily K member 16 flag
0
Mm Hs SCGN 0.014 0.875 0 0.028 0 6 Delta cells Endoderm Pancreas SECRET,DJ501N12.8,SEGN,CALBL secretagogin, EF-hand calcium binding protein flag
0
Mm Hs ISL1 0.028 1 1 0.011 0.031 13 Delta cells Endoderm Pancreas Isl-1,ISLET1 ISL LIM homeobox 1 flag
0
Mm Hs HHEX 0.037 1 1 0.02 0.039 8 Delta cells Endoderm Pancreas HEX,HOX11L-PEN,PRHX hematopoietically expressed homeobox flag
0
Mm Hs RESP18 0.062 0 0 0 0 3 Delta cells Endoderm Pancreas regulated endocrine specific protein 18 flag
0
Mm Hs PAX4 0.001 0 0 0 0.001 2 Delta cells Endoderm Pancreas MODY9 paired box 4 Yflag
0
Mm Hs RBP4 0.032 0.875 0 0.035 0 2 Delta cells Endoderm Pancreas retinol binding protein 4 Yflag
0
Mm Hs PCSK9 0.005 0 0 0 0.006 2 Delta cells Endoderm Pancreas NARC-1,FH3,HCHOLA3 proprotein convertase subtilisin/kexin type 9 Yflag
0
Mm Hs FFAR4 0.005 0.25 0.9 0.004 0.004 2 Delta cells Endoderm Pancreas PGR4,GPR129,GPR120,O3FAR1 free fatty acid receptor 4 Yflag

Datasets with computationally identified Delta cells

SRA SRS tissue cluster cell type p-value FDR View
SRA701877 SRS3279692 Pancreatic islets 9 Delta cells 4.86E-6 9.19E-4 view data
SRA745567 SRS3600300 Pancreatic islets 2 Delta cells 1.98E-10 4.05E-8 view data
SRA701877 SRS3279686 Pancreatic islets 5 Delta cells 3.02E-4 2.98E-2 view data
SRA585365 SRS3297652 Pancreas 22 Delta cells 5.41E-9 2.79E-6 view data
SRA701877 SRS3279691 Pancreatic islets 9 Delta cells 3.94E-6 5.66E-4 view data
SRA653146 SRS2874280 Pancreas 6 Delta cells 8.15E-11 1.37E-8 view data
SRA745567 SRS3600299 Pancreatic islets 15 Delta cells 8.45E-9 1.32E-6 view data
SRA585365 SRS2345687 Pancreas 19 Delta cells 2.14E-6 1.42E-3 view data
SRA745567 SRS3600301 Pancreatic islets 7 Delta cells 2.02E-9 2.72E-7 view data
SRA784304 SRS3823097 Pancreatic progenitor cells 2 Delta cells 1.69E-8 3.36E-6 view data
SRA585365 SRS3297650 Pancreas 24 Delta cells 1.97E-7 1.27E-4 view data
SRA585365 SRS3297651 Pancreas 22 Delta cells 3.98E-8 1.45E-5 view data
SRA585365 SRS3297654 Pancreas 17 Delta cells 3.19E-8 1.36E-5 view data
SRA701877 SRS3279687 Pancreatic islets 6 Delta cells 1.56E-4 1.87E-2 view data
SRA701877 SRS3279689 Pancreatic islets 8 Delta cells 2.05E-4 1.59E-2 view data
SRA784304 SRS3823100 Pancreatic progenitor cells 5 Delta cells 9.70E-7 3.45E-4 view data
SRA701877 SRS3279690 Pancreatic islets 8 Delta cells 4.15E-5 4.20E-3 view data
SRA701877 SRS3279693 Pancreatic islets 7 Delta cells 1.86E-6 3.54E-4 view data