Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: Endothelium refers to cells that line the interior surface of blood vessels and lymphatic vessels, forming an interface between circulating blood or lymph in the lumen and the rest of the vessel wall.

Gene expression markers for Endothelial cells (aorta)

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm CAR8 0.013 0 0.583 0 0.016 3 Endothelial cells (aorta) Mesoderm Vasculature carbonic anhydrase 8 flag
0
Mm H2-Q6 0.023 0 0.75 0 0.027 2 Endothelial cells (aorta) Mesoderm Vasculature histocompatibility 2, Q region locus 6 flag
0
Mm ADH1 0.017 0 0.75 0 0.021 2 Endothelial cells (aorta) Mesoderm Vasculature alcohol dehydrogenase 1 (class I) flag
0
Mm Hs BMP6 0.004 0 0.667 0 0.004 1 Endothelial cells (aorta) Mesoderm Vasculature VGR1,VGR bone morphogenetic protein 6 flag
0
Mm Hs BACE2 0.018 0 0.667 0.049 0.011 3 Endothelial cells (aorta) Mesoderm Vasculature CEAP1,DRAP,ALP56,AEPLC beta-secretase 2 flag
0
SSFA2 0.011 0 0 0.023 0 1 Endothelial cells (aorta) Mesoderm Vasculature flag
0
Mm Hs KLK8 0.016 0 0.417 0 0.02 1 Endothelial cells (aorta) Mesoderm Vasculature HNP,TADG14,ovasin,PRSS19 kallikrein related peptidase 8 flag
0
Mm Hs EPHX2 0.009 0 0.667 0.006 0.01 3 Endothelial cells (aorta) Mesoderm Vasculature epoxide hydrolase 2 Yflag
0
Mm Hs CYP1B1 0.016 0 0.5 0.049 0.009 5 Endothelial cells (aorta) Mesoderm Vasculature CP1B,GLC3A cytochrome P450 family 1 subfamily B member 1 Yflag
0
Mm Hs STAB1 0.018 0 0 0.003 0 4 Endothelial cells (aorta) Mesoderm Vasculature KIAA0246,STAB-1,FEEL-1,CLEVER-1,FELE-1,FEX1,SCARH2 stabilin 1 flag
0
Mm Hs PER3 0.025 0 0.833 0 0.031 2 Endothelial cells (aorta) Mesoderm Vasculature period circadian regulator 3 Yflag
0
Mm Hs COL4A3 0.006 0 0.417 0.001 0.007 4 Endothelial cells (aorta) Mesoderm Vasculature collagen type IV alpha 3 chain Yflag
0
Mm Hs SULF1 0.013 0 0 0.018 0 4 Endothelial cells (aorta) Mesoderm Vasculature KIAA1077,SULF-1,hSulf-1 sulfatase 1 flag
0
Mm Hs ACKR3 0.01 0 0.5 0.007 0.011 5 Endothelial cells (aorta) Mesoderm Vasculature GPR159,CMKOR1,CXCR7 atypical chemokine receptor 3 flag
0
Mm Hs ATL2 0.013 0 0.75 0.004 0.015 2 Endothelial cells (aorta) Mesoderm Vasculature ARL6IP2 atlastin GTPase 2 flag
0
Mm Hs TNS2 0.007 0 0 0.003 0 2 Endothelial cells (aorta) Mesoderm Vasculature KIAA1075,C1-TEN,TENC1 tensin 2 flag
0
Mm Hs NOS3 0.003 0 0.75 0.007 0.002 2 Endothelial cells (aorta) Mesoderm Vasculature ECNOS,eNOS nitric oxide synthase 3 Yflag
0
Mm Hs THBD 0.022 0 0 0.013 0 3 Endothelial cells (aorta) Mesoderm Vasculature CD141 thrombomodulin Yflag
0
Mm Hs FAM198B 0.011 0 0.833 0.005 0.012 2 Endothelial cells (aorta) Mesoderm Vasculature FLJ38155,DKFZp434L142,ENED,C4orf18 family with sequence similarity 198 member B flag
0
Mm Hs MARVELD1 0.007 0 0.833 0.01 0.006 1 Endothelial cells (aorta) Mesoderm Vasculature MGC4415,GB14,FLJ23440,FLJ22343,bA548K23.8,MRVLDC1 MARVEL domain containing 1 flag
0
Mm Hs CLEC1A 0.007 0 0.75 0.002 0.008 1 Endothelial cells (aorta) Mesoderm Vasculature CLEC1,MGC34328 C-type lectin domain family 1 member A flag
0
Mm Hs MALL 0.008 0 0.75 0.003 0.009 1 Endothelial cells (aorta) Mesoderm Vasculature BENE mal, T cell differentiation protein like flag
0
Mm Hs KLK10 0.004 0 0.5 0.002 0.004 2 Endothelial cells (aorta) Mesoderm Vasculature NES1 kallikrein related peptidase 10 flag
0
Mm Hs ITGA5 0.016 0 0.75 0.018 0.016 3 Endothelial cells (aorta) Mesoderm Vasculature CD49e,FNRA integrin subunit alpha 5 flag
0
Mm Hs CRACR2B 0.016 0 0.75 0.007 0.018 1 Endothelial cells (aorta) Mesoderm Vasculature MGC45840,EFCAB4A calcium release activated channel regulator 2B flag
0
Mm Hs EHD3 0.017 0 0 0 0.021 2 Endothelial cells (aorta) Mesoderm Vasculature PAST3 EH domain containing 3 flag
0
Mm Hs CYTL1 0.012 0 1 0.028 0.007 3 Endothelial cells (aorta) Mesoderm Vasculature C17,C4orf4 cytokine like 1 flag
0
Mm GKN3 0.004 0 0.917 0 0.004 2 Endothelial cells (aorta) Mesoderm Vasculature gastrokine 3 flag
0
Mm Hs GXYLT2 0.01 0 1 0.003 0.01 1 Endothelial cells (aorta) Mesoderm Vasculature GLT8D4 glucoside xylosyltransferase 2 flag
0
Mm Hs ACE 0.022 0 1 0.026 0.021 3 Endothelial cells (aorta) Mesoderm Vasculature ACE1,CD143,DCP1 angiotensin I converting enzyme Yflag
0
Mm Hs PTGIS 0.019 0 1 0.003 0.021 1 Endothelial cells (aorta) Mesoderm Vasculature PGIS,CYP8A1 prostaglandin I2 synthase Yflag
0
Mm Hs PCOLCE2 0.017 0 0.75 0.01 0.019 2 Endothelial cells (aorta) Mesoderm Vasculature PCPE2 procollagen C-endopeptidase enhancer 2 flag
0
Mm Hs ADH7 0.006 0 0.917 0.004 0.006 2 Endothelial cells (aorta) Mesoderm Vasculature ADH-4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide flag
0
Mm Hs SOD3 0.027 0 0 0.061 0 3 Endothelial cells (aorta) Mesoderm Vasculature EC-SOD superoxide dismutase 3 flag
0
Mm Hs BMP4 0.019 0 0.833 0.024 0.016 6 Endothelial cells (aorta) Mesoderm Vasculature BMP2B bone morphogenetic protein 4 Yflag
0
Mm Hs GJA5 0.002 0 0.833 0.002 0.001 5 Endothelial cells (aorta) Mesoderm Vasculature CX40 gap junction protein alpha 5 Yflag
0
Mm Hs P3H3 0.014 0 0.583 0.004 0.017 1 Endothelial cells (aorta) Mesoderm Vasculature GRCB,HSU47926,LEPREL2 prolyl 3-hydroxylase 3 flag
0
Mm Hs SMOC1 0.006 0 0 0.006 0 2 Endothelial cells (aorta) Mesoderm Vasculature SPARC related modular calcium binding 1 Yflag
0
Mm Hs PROCR 0.016 0 0.833 0.029 0.012 3 Endothelial cells (aorta) Mesoderm Vasculature EPCR,CCD41,CD201 protein C receptor flag
0
Mm Hs BMX 0.003 0 0.833 0.006 0.002 2 Endothelial cells (aorta) Mesoderm Vasculature PSCTK3 BMX non-receptor tyrosine kinase flag
0
Mm Hs PDE3A 0.01 0 0.917 0.001 0.011 2 Endothelial cells (aorta) Mesoderm Vasculature CGI-PDE phosphodiesterase 3A Yflag
0
Mm Hs LMCD1 0.01 0 0.917 0.025 0.006 1 Endothelial cells (aorta) Mesoderm Vasculature LIM and cysteine rich domains 1 flag
0
Mm Hs TRIM47 0.02 0 0 0.014 0 1 Endothelial cells (aorta) Mesoderm Vasculature GOA,RNF100 tripartite motif containing 47 flag
0
Mm Hs PTPRJ 0.011 0 0.833 0 0.013 1 Endothelial cells (aorta) Mesoderm Vasculature DEP1,HPTPeta,CD148 protein tyrosine phosphatase, receptor type J Yflag
0
Mm Hs AMIGO2 0.004 0 0.667 0.003 0.003 1 Endothelial cells (aorta) Mesoderm Vasculature ALI1,DEGA adhesion molecule with Ig like domain 2 flag
0
Mm Hs PI16 0.011 0 1 0.002 0.012 2 Endothelial cells (aorta) Mesoderm Vasculature MGC45378,dJ90K10.5,MSMBBP,CD364 peptidase inhibitor 16 flag
0
Mm Hs CPQ 0.03 0 0.75 0.013 0.034 1 Endothelial cells (aorta) Mesoderm Vasculature LDP,PGCP carboxypeptidase Q flag
0
Mm Hs TMEM184B 0.015 0 0 0.016 0 1 Endothelial cells (aorta) Mesoderm Vasculature HS5O6A,DKFZP586A1024,FM08,C22orf5 transmembrane protein 184B flag
0
Mm Hs SYNPO 0.009 0 0 0.009 0 2 Endothelial cells (aorta) Mesoderm Vasculature KIAA1029 synaptopodin flag
0
Mm Hs STXBP6 0.014 0 0 0.014 0 1 Endothelial cells (aorta) Mesoderm Vasculature amisyn,HSPC156 syntaxin binding protein 6 flag
0
Mm Hs NKX2-3 0.003 0 0.333 0.004 0.003 2 Endothelial cells (aorta) Mesoderm Vasculature NKX2.3,CSX3,NKX4-3,NKX2C NK2 homeobox 3 flag
0
Mm Hs MICAL2 0.008 0 0.5 0.01 0.008 1 Endothelial cells (aorta) Mesoderm Vasculature KIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 flag
0
Mm Hs EMILIN1 0.028 0 0.75 0.03 0.027 2 Endothelial cells (aorta) Mesoderm Vasculature DKFZp586M121,gp115 elastin microfibril interfacer 1 flag
0
Mm Hs ITGB4 0.013 0 0.417 0.014 0.013 6 Endothelial cells (aorta) Mesoderm Vasculature CD104 integrin subunit beta 4 Yflag
0
Mm Hs FAS 0.011 0 0.5 0.015 0.01 4 Endothelial cells (aorta) Mesoderm Vasculature CD95,APO-1,FAS1,APT1,TNFRSF6 Fas cell surface death receptor Yflag
0
Mm Hs FGD5 0.007 0 0.667 0.001 0.008 2 Endothelial cells (aorta) Mesoderm Vasculature ZFYVE23,FLJ39957,FLJ00274 FYVE, RhoGEF and PH domain containing 5 flag
0
Mm Hs KAZALD1 0.009 0 0.417 0 0.01 1 Endothelial cells (aorta) Mesoderm Vasculature FKSG40,FKSG28 Kazal type serine peptidase inhibitor domain 1 flag
0
Mm Hs DENND5B 0.013 0 0.583 0.006 0.015 3 Endothelial cells (aorta) Mesoderm Vasculature MGC24039 DENN domain containing 5B flag
0
Mm Hs DHH 0.002 0 0.417 0 0.003 2 Endothelial cells (aorta) Mesoderm Vasculature HHG-3,MGC35145 desert hedgehog Yflag
0
Mm Hs FOXC2 0.003 0 0.333 0.008 0.002 3 Endothelial cells (aorta) Mesoderm Vasculature MFH-1,FKHL14 forkhead box C2 Yflag
0
Mm Hs ATP2A3 0.01 0 0.833 0.011 0.01 2 Endothelial cells (aorta) Mesoderm Vasculature SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 flag
0
Mm Hs ARHGEF15 0.01 0 0.75 0.001 0.012 2 Endothelial cells (aorta) Mesoderm Vasculature KIAA0915,Vsm-RhoGEF,ARGEF15,FLJ13791,MGC44868 Rho guanine nucleotide exchange factor 15 flag
0
Mm Hs ENPP4 0.01 0 0.583 0.002 0.011 1 Endothelial cells (aorta) Mesoderm Vasculature NPP4,KIAA0879 ectonucleotide pyrophosphatase/phosphodiesterase 4 flag
0
Mm Hs GRASP 0.011 0 0.417 0.001 0.013 1 Endothelial cells (aorta) Mesoderm Vasculature Tamalin general receptor for phosphoinositides 1 associated scaffold protein flag
0
Mm Hs ITGBL1 0.004 0 0.333 0 0.004 1 Endothelial cells (aorta) Mesoderm Vasculature TIED integrin subunit beta like 1 flag
0
Mm Hs SHE 0.006 0 0 0.004 0 1 Endothelial cells (aorta) Mesoderm Vasculature Src homology 2 domain containing E flag
0
Mm Hs TMTC1 0.005 0 0 0.007 0 1 Endothelial cells (aorta) Mesoderm Vasculature ARG99,OLF,FLJ31400,FLJ41625 transmembrane and tetratricopeptide repeat containing 1 flag
0
Mm Hs SULT1A1 0.012 0 0 0.02 0 3 Endothelial cells (aorta) Mesoderm Vasculature P-PST,STP1 sulfotransferase family 1A member 1 flag
0
Mm Hs PKN3 0.001 0 0.5 0 0 1 Endothelial cells (aorta) Mesoderm Vasculature PKNbeta,UTDP4-1 protein kinase N3 flag
0
Mm Hs HFE 0.017 0 0.5 0 0.021 5 Endothelial cells (aorta) Mesoderm Vasculature HLA-H homeostatic iron regulator Yflag
0
Mm Hs NR1D1 0.005 0 0.333 0.001 0.006 1 Endothelial cells (aorta) Mesoderm Vasculature ear-1,hRev,Rev-ErbAalpha,REVERBA,REVERBalpha,THRAL nuclear receptor subfamily 1 group D member 1 flag
0
Mm Hs TMTC2 0.002 0 0 0.003 0 1 Endothelial cells (aorta) Mesoderm Vasculature DKFZp762A217 transmembrane and tetratricopeptide repeat containing 2 flag
0
Mm Hs GIMAP4 0.043 0 0.583 0.057 0.04 2 Endothelial cells (aorta) Mesoderm Vasculature HIMAP4,FLJ11110,IMAP4,IAN1 GTPase, IMAP family member 4 flag
0
Mm Hs LAMB2 0.019 0 0.917 0.013 0.02 4 Endothelial cells (aorta) Mesoderm Vasculature NPHS5,LAMS laminin subunit beta 2 Yflag
0
Mm Hs WBP1L 0.014 0 0 0.004 0 1 Endothelial cells (aorta) Mesoderm Vasculature FLJ20154,OPAL1,C10orf26 WW domain binding protein 1 like flag
0
Mm Hs SOX18 0.012 0 0 0.02 0 3 Endothelial cells (aorta) Mesoderm Vasculature SRY-box 18 Yflag
0
Mm GSTT1 0.022 0 0.667 0 0.027 4 Endothelial cells (aorta) Mesoderm Vasculature glutathione S-transferase theta 1 flag
0
Mm Hs APH1B 0.007 0 0.667 0.036 0.001 1 Endothelial cells (aorta) Mesoderm Vasculature PSFL,APH-1B,DKFZp564D0372 aph-1 homolog B, gamma-secretase subunit flag
0
Mm Hs PDIA5 0.011 0 0.333 0.005 0.013 2 Endothelial cells (aorta) Mesoderm Vasculature FLJ30401 protein disulfide isomerase family A member 5 flag
0
Mm Hs NXN 0.022 0 0.667 0.019 0.022 1 Endothelial cells (aorta) Mesoderm Vasculature FLJ12614,NRX nucleoredoxin flag
0
Mm Hs FKBP7 0.031 0 0.5 0.018 0.032 2 Endothelial cells (aorta) Mesoderm Vasculature FKBP23 FK506 binding protein 7 flag
0
Mm Hs HYAL2 0.031 0 0.667 0.071 0.021 2 Endothelial cells (aorta) Mesoderm Vasculature LuCa-2,LUCA2 hyaluronoglucosaminidase 2 flag
0
Mm Hs HEY2 0.004 0 0.667 0.015 0.001 3 Endothelial cells (aorta) Mesoderm Vasculature bHLHb32,HERP1,HESR2 hes related family bHLH transcription factor with YRPW motif 2 flag
0
Mm Hs ARL4D 0.014 0 0.583 0.036 0.008 2 Endothelial cells (aorta) Mesoderm Vasculature ARF4L ADP ribosylation factor like GTPase 4D flag
0
Mm Hs NPR1 0.009 0 0.75 0.002 0.011 4 Endothelial cells (aorta) Mesoderm Vasculature GUCY2A,ANPa,ANPRA,NPRA natriuretic peptide receptor 1 flag
0
Mm Hs NTN1 0.007 0 0.833 0 0.008 2 Endothelial cells (aorta) Mesoderm Vasculature NTN1L netrin 1 flag
0
Mm Hs FZD4 0.007 0 0.75 0.001 0.008 2 Endothelial cells (aorta) Mesoderm Vasculature CD344 frizzled class receptor 4 Yflag
0
Mm Hs LOX 0.017 0 0.5 0.015 0.017 9 Endothelial cells (aorta) Mesoderm Vasculature lysyl oxidase flag
0
Mm Hs EFNB2 0.016 0 0.5 0.029 0.014 4 Endothelial cells (aorta) Mesoderm Vasculature LERK5,Htk-L,HTKL,MGC126226,MGC126227,MGC126228,EPLG5 ephrin B2 flag
0
Mm Hs SMAD6 0.005 0 0 0.001 0 1 Endothelial cells (aorta) Mesoderm Vasculature HsT17432 SMAD family member 6 Yflag
0
Mm Hs ITGA9 0.004 0 0.667 0 0.004 2 Endothelial cells (aorta) Mesoderm Vasculature RLC,ITGA4L,ALPHA-RLC integrin subunit alpha 9 flag
0
Mm Hs CMKLR1 0.003 0 0.417 0 0.003 3 Endothelial cells (aorta) Mesoderm Vasculature RVER1 chemerin chemokine-like receptor 1 flag
0
SQRDL 0.015 NA NA NA NA 1 Endothelial cells (aorta) Mesoderm Vasculature flag
0
Mm Hs CHST12 0.023 0 0.5 0.027 0.018 1 Endothelial cells (aorta) Mesoderm Vasculature C4S-2,C4ST2 carbohydrate sulfotransferase 12 flag
-1
Mm Hs COL4A4 0.007 0 0.583 0.003 0.008 4 Endothelial cells (aorta) Mesoderm Vasculature CA44 collagen type IV alpha 4 chain Yflag
-1
Mm Hs CALCRL 0.017 0 0.5 0.025 0.016 3 Endothelial cells (aorta) Mesoderm Vasculature CGRPR,CRLR calcitonin receptor like receptor flag

Datasets with computationally identified Endothelial cells (aorta)

SRA SRS tissue cluster cell type p-value FDR View
SRA734405 SRS3507695 Aorta 0 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data
SRA734405 SRS3507695 Aorta 1 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data
SRA734405 SRS3507695 Aorta 3 Endothelial cells (aorta) 4.63E-42 4.32E-39 view data
SRA734405 SRS3507695 Aorta 4 Endothelial cells (aorta) 2.10E-10 7.37E-8 view data
SRA734405 SRS3507695 Aorta 10 Endothelial cells (aorta) 3.45E-10 9.66E-8 view data
SRA728071 SRS3458845 Foam cells from aortas 9 Endothelial cells (aorta) 6.64E-30 4.31E-27 view data
SRA734405 SRS3507694 Aorta 0 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data
SRA734405 SRS3507694 Aorta 1 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data
SRA734405 SRS3507694 Aorta 2 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data
SRA734405 SRS3507694 Aorta 3 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data
SRA734405 SRS3507694 Aorta 5 Endothelial cells (aorta) 3.42E-10 6.62E-8 view data
SRA734405 SRS3507694 Aorta 7 Endothelial cells (aorta) 0.00E+0 0.00E+0 view data