Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Gene expression markers for Gamma delta T cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
11
Mm Hs S100B 0.066 0.013 0 0.034 0 8 Gamma delta T cells Mesoderm Immune system S100beta S100 calcium binding protein B flag
3
Hs TUBB 0.104 0.067 0 0.513 0 1 Gamma delta T cells Mesoderm Immune system OK/SW-cl.56,MGC16435,M40,Tubb5 tubulin beta class I Yflag
2
Mm Hs STMN1 0.43 0.08 0 0.428 0 2 Gamma delta T cells Mesoderm Immune system OP18,PR22,PP19,Lag,FLJ32206,LAP18,C1orf215 stathmin 1 flag
2
Hs TRGV9 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V2,TCRGV9 T cell receptor gamma variable 9 flag
2
Hs TRGJP2 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system JP2,TCRGJP2 T cell receptor gamma joining P2 flag
2
Hs TRGC1 0 0.013 0 0.002 0 1 Gamma delta T cells Mesoderm Immune system TCRGC1 T cell receptor gamma constant 1 flag
1
Mm Hs H2AFZ 0.486 0.16 0.333 0.655 0.44 1 Gamma delta T cells Mesoderm Immune system H2A.Z,H2AZ H2A histone family member Z flag
1
Hs TRGV11 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V4P,TCRGV11 T cell receptor gamma variable 11 (non-functional) flag
1
Hs TRGV1 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V1S1P,TCRGV1 T cell receptor gamma variable 1 (non-functional) flag
1
Hs TRGV3 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V1S3,TCRGV3 T cell receptor gamma variable 3 flag
1
Mm Hs NUSAP1 0.064 0.053 0 0.084 0.058 1 Gamma delta T cells Mesoderm Immune system FLJ13421,ANKT,NuSAP1,BM037,PRO0310p1,Q0310 nucleolar and spindle associated protein 1 flag
1
Mm Hs TRGJ2 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system TCRGJ2 T cell receptor gamma joining 2 flag
1
Mm Hs HMGB2 0.279 0.387 0.222 0.324 0.262 2 Gamma delta T cells Mesoderm Immune system HMG2 high mobility group box 2 flag
1
Mm Hs CCL5 0.042 0.987 1 0.064 0.032 6 Gamma delta T cells Mesoderm Immune system RANTES,SISd,TCP228,MGC17164,D17S136E,SCYA5 C-C motif chemokine ligand 5 flag
1
Mm Hs TROAP 0.005 0 0 0.016 0 1 Gamma delta T cells Mesoderm Immune system TASTIN trophinin associated protein flag
0
Mm Hs CENPF 0.086 0.04 0 0.112 0.077 1 Gamma delta T cells Mesoderm Immune system hcp-1 centromere protein F Yflag
0
Mm Hs CCNB1 0.069 0.013 0 0.084 0.062 1 Gamma delta T cells Mesoderm Immune system CCNB cyclin B1 flag
0
Hs TRGV4 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V1S4,TCRGV4 T cell receptor gamma variable 4 flag
0
Mm Hs H2AFX 0.128 0.027 0 0.064 0.139 1 Gamma delta T cells Mesoderm Immune system H2AX H2A histone family member X flag
0
Hs TRGV5 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V1S5,TCRGV5 T cell receptor gamma variable 5 flag
0
Hs TRGV8 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V1S8,TCRGV8 T cell receptor gamma variable 8 flag
0
Mm Hs TRGJ1 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system TCRGJ1 T cell receptor gamma joining 1 flag
0
Mm Hs TRDV3 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system hDV103S1 T cell receptor delta variable 3 flag
0
Hs TRGJP1 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system JP1,TCRGJP1 T cell receptor gamma joining P1 flag
0
Hs TRGJP 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system JP,TCRGJP T cell receptor gamma joining P flag
0
Hs TRGC2 0.001 0.027 0 0.004 0 1 Gamma delta T cells Mesoderm Immune system TRGC2(2X),TRGC2(3X),TCRGC2 T cell receptor gamma constant 2 flag
0
Mm Hs TRDD1 0 NA NA NA NA 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta diversity 1 flag
0
Mm Hs TRDD2 0 NA NA NA NA 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta diversity 2 flag
0
Hs TRDD3 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta diversity 3 flag
0
Mm Hs TRDJ1 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta joining 1 flag
0
Mm Hs TRDJ2 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta joining 2 flag
0
Hs TRDJ3 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta joining 3 flag
0
Hs TRDJ4 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system T cell receptor delta joining 4 flag
0
Mm Hs TRDV1 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system hDV101S1 T cell receptor delta variable 1 flag
0
Hs TRDV2 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system hDV102S1,MGC117421 T cell receptor delta variable 2 flag
0
Hs GNLY 0.013 1 0 0.06 0 2 Gamma delta T cells Mesoderm Immune system NKG5,LAG-2,D2S69E,TLA519,LAG2 granulysin flag
0
Mm Hs CLIC3 0.015 0.453 0 0.014 0.012 1 Gamma delta T cells Mesoderm Immune system chloride intracellular channel 3 flag
0
Mm Hs PTGDS 0.054 0 0 0.06 0.055 10 Gamma delta T cells Mesoderm Immune system L-PGDS prostaglandin D2 synthase flag
0
Mm Hs GZMB 0.017 0.933 0.667 0.039 0.008 7 Gamma delta T cells Mesoderm Immune system CCPI,CGL-1,CSP-B,CGL1,CTSGL1,SECT,CSPB granzyme B flag
0
Hs FGFBP2 0.005 0.773 0 0.011 0 2 Gamma delta T cells Mesoderm Immune system fibroblast growth factor binding protein 2 flag
0
Mm Hs NKG7 0.056 1 1 0.086 0.045 3 Gamma delta T cells Mesoderm Immune system GMP-17 natural killer cell granule protein 7 flag
0
Mm Hs PRF1 0.009 0.787 0.333 0.013 0.005 3 Gamma delta T cells Mesoderm Immune system PFP,HPLH2 perforin 1 Yflag
0
Hs KLRF1 0.003 0.627 0 0.006 0 2 Gamma delta T cells Mesoderm Immune system CLEC5C,NKp80 killer cell lectin like receptor F1 flag
0
Mm Hs HOPX 0.033 0.853 0 0.073 0.022 10 Gamma delta T cells Mesoderm Immune system LAGY,OB1,NECC1,SMAP31 HOP homeobox flag
0
Mm Hs CST7 0.028 0.973 0.222 0.047 0.019 3 Gamma delta T cells Mesoderm Immune system cystatin F flag
0
Mm Hs KLRD1 0.02 0.853 1 0.019 0.016 3 Gamma delta T cells Mesoderm Immune system CD94 killer cell lectin like receptor D1 flag
0
Mm Hs CTSW 0.026 0.96 0.556 0.04 0.019 4 Gamma delta T cells Mesoderm Immune system cathepsin W flag
0
Mm Hs SPON2 0.017 0.533 0 0.037 0 7 Gamma delta T cells Mesoderm Immune system DIL1 spondin 2 flag
0
Mm Hs IFITM1 0.059 0.133 0 0.03 0.065 3 Gamma delta T cells Mesoderm Immune system 9-27,CD225,DSPA2a,IFI17 interferon induced transmembrane protein 1 flag
0
Mm Hs GZMA 0.026 0.92 1 0.045 0.018 3 Gamma delta T cells Mesoderm Immune system HFSP,CTLA3 granzyme A flag
0
Mm Hs CD247 0.019 0.8 0 0.038 0.013 4 Gamma delta T cells Mesoderm Immune system CD3H,CD3Q,CD3Z CD247 molecule Yflag
0
Mm Hs BIRC5 0.121 0.027 0.111 0.113 0.118 1 Gamma delta T cells Mesoderm Immune system survivin,API4 baculoviral IAP repeat containing 5 flag
0
Mm Hs CD7 0.03 0.907 0.556 0.084 0.016 5 Gamma delta T cells Mesoderm Immune system LEU-9,TP41,Tp40 CD7 molecule flag
0
Mm Hs ADGRG1 0.045 0.093 0 0.02 0.05 3 Gamma delta T cells Mesoderm Immune system TM7LN4,TM7XN1,GPR56 adhesion G protein-coupled receptor G1 Yflag
0
Mm Hs TRDC 0.011 0.653 0 0.011 0 4 Gamma delta T cells Mesoderm Immune system T cell receptor delta constant flag
0
Mm Hs TYMS 0.087 0.04 0 0.107 0 1 Gamma delta T cells Mesoderm Immune system Tsase,TMS,HsT422 thymidylate synthetase flag
0
Mm Hs UBE2C 0.004 0 0 0.016 0 1 Gamma delta T cells Mesoderm Immune system UBCH10 ubiquitin conjugating enzyme E2 C flag
0
Mm Hs TUBA1B 0.517 0 0 0.009 0 1 Gamma delta T cells Mesoderm Immune system K-ALPHA-1 tubulin alpha 1b flag
0
Mm Hs ASPM 0.021 0.027 0 0.035 0.016 1 Gamma delta T cells Mesoderm Immune system Calmbp1,FLJ10517,FLJ10549,MCPH5 abnormal spindle microtubule assembly Yflag
0
Mm Hs CENPA 0.083 0.027 0 0.016 0.096 1 Gamma delta T cells Mesoderm Immune system CENP-A,CenH3 centromere protein A flag
0
Mm Hs TOP2A 0.107 0.027 0 0.093 0 1 Gamma delta T cells Mesoderm Immune system TOP2 DNA topoisomerase II alpha flag
0
Mm Hs AURKB 0.04 0.027 0 0.038 0.037 1 Gamma delta T cells Mesoderm Immune system Aik2,IPL1,AurB,ARK2,STK5,PPP1R48,STK12 aurora kinase B flag
-1
Hs TRGV10 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system V3P,TCRGV10 T cell receptor gamma variable 10 (non-functional) flag
-1
Mm Hs TRGV2 0 0 0 0 0 1 Gamma delta T cells Mesoderm Immune system VIS2,TCRGV2 T cell receptor gamma variable 2 flag
-1
Mm Hs PCNA 0.121 0.067 0 0.15 0.113 1 Gamma delta T cells Mesoderm Immune system proliferating cell nuclear antigen Yflag
-2
Mm Hs MKI67 0.083 0.053 0 0.077 0.081 2 Gamma delta T cells Mesoderm Immune system MIB-,PPP1R105 marker of proliferation Ki-67 flag

Datasets with computationally identified Gamma delta T cells

SRA SRS tissue cluster cell type p-value FDR View
SRA716608 SRS3391629 Liver 12 Gamma delta T cells 3.06E-26 4.60E-23 view data
SRA740174 SRS3548782 Bone marrow 7 Gamma delta T cells 1.35E-6 6.55E-4 view data
SRA749327 SRS3693913 PBMC 2 Gamma delta T cells 2.77E-22 5.27E-19 view data
SRA713577 SRS3363004 Peripheral blood mononuclear cells 3 Gamma delta T cells 2.71E-26 3.08E-23 view data
SRA638923 SRS2797112 Small intestine 3 Gamma delta T cells 6.01E-11 1.61E-8 view data
SRA867342 SRS4550173 T cells 9 Gamma delta T cells 1.88E-8 9.02E-6 view data
SRA779509 SRS3805247 Bone marrow 14 Gamma delta T cells 4.42E-25 3.60E-22 view data
SRA867342 SRS4550172 T cells 9 Gamma delta T cells 2.36E-6 6.16E-4 view data
SRA779509 SRS3805268 Bone marrow 12 Gamma delta T cells 5.64E-25 7.32E-22 view data
SRA716608 SRS3391632 Liver 12 Gamma delta T cells 1.96E-26 3.46E-23 view data
SRA716608 SRS3391632 Liver 15 Gamma delta T cells 2.69E-18 1.35E-15 view data
SRA779509 SRS3805245 Bone marrow 7 Gamma delta T cells 3.13E-26 6.09E-23 view data
SRA768499 SRS3744990 NK cells from spleen 0 Gamma delta T cells 1.57E-16 5.41E-14 view data
SRA768499 SRS3744990 NK cells from spleen 3 Gamma delta T cells 8.89E-18 4.59E-15 view data
SRA768499 SRS3744988 NK cells from blood 4 Gamma delta T cells 3.82E-7 2.27E-5 view data
SRA550660 SRS2089637 Peripheral blood mononuclear cells 3 Gamma delta T cells 3.35E-10 2.88E-7 view data
SRA665588 SRS3034030 Lung 10 Gamma delta T cells 7.51E-5 1.58E-2 view data
SRA716608 SRS3391633 Liver 5 Gamma delta T cells 1.88E-24 2.66E-21 view data
SRA635314 SRS2727268 Whole kidney 10 Gamma delta T cells 1.69E-7 3.46E-5 view data
SRA768499 SRS3744979 NK cells from spleen 0 Gamma delta T cells 6.34E-21 6.35E-18 view data
SRA768499 SRS3744979 NK cells from spleen 2 Gamma delta T cells 3.48E-19 1.74E-16 view data
SRA768499 SRS3744979 NK cells from spleen 3 Gamma delta T cells 4.53E-12 5.05E-10 view data
SRA779509 SRS3805263 Bone marrow 3 Gamma delta T cells 1.29E-28 2.41E-25 view data
SRA768499 SRS3744987 NK cells from blood 2 Gamma delta T cells 2.14E-4 1.28E-2 view data
SRA779509 SRS3805264 Bone marrow 1 Gamma delta T cells 3.82E-22 4.55E-19 view data
SRA782908 SRS3815606 Decidua 10 Gamma delta T cells 2.82E-11 8.61E-9 view data
SRA782908 SRS3815606 Decidua 18 Gamma delta T cells 1.87E-13 1.12E-10 view data
SRA661790 SRS2995084 Monocyte-derived macrophages 2 Gamma delta T cells 2.74E-7 9.79E-5 view data
SRA745734 SRS3600975 Intestinal epithelium 3 Gamma delta T cells 3.88E-10 2.60E-8 view data
SRA779509 SRS3805266 Bone marrow 6 Gamma delta T cells 1.77E-27 1.88E-24 view data
SRA763890 SRS3720958 Blood CD8+ T lymphocytes 6 Gamma delta T cells 3.62E-18 2.16E-15 view data
SRA749327 SRS3693912 PBMC 5 Gamma delta T cells 7.76E-11 5.73E-8 view data
SRA550660 SRS2089639 Peripheral blood mononuclear cells 8 Gamma delta T cells 6.47E-16 4.20E-13 view data
SRA779509 SRS3805269 Bone marrow 3 Gamma delta T cells 3.15E-28 5.85E-25 view data
SRA779509 SRS3805246 Bone marrow 5 Gamma delta T cells 2.14E-26 4.32E-23 view data
SRA779509 SRS3805254 Bone marrow 11 Gamma delta T cells 9.50E-27 1.18E-23 view data
SRA550660 SRS2089638 Peripheral blood mononuclear cells 3 Gamma delta T cells 2.01E-8 1.16E-5 view data
SRA779509 SRS3805257 Bone marrow 5 Gamma delta T cells 3.85E-27 6.48E-24 view data
SRA779509 SRS3805253 Bone marrow 5 Gamma delta T cells 3.15E-27 4.96E-24 view data
SRA749327 SRS3693911 PBMC 1 Gamma delta T cells 1.62E-24 2.74E-21 view data
SRA779509 SRS3805262 Bone marrow 8 Gamma delta T cells 1.92E-25 1.87E-22 view data
SRA779509 SRS3805252 Bone marrow 6 Gamma delta T cells 1.69E-26 2.84E-23 view data
SRA779509 SRS3805259 Bone marrow 5 Gamma delta T cells 2.00E-27 6.68E-24 view data
SRA779509 SRS3805259 Bone marrow 12 Gamma delta T cells 4.49E-20 3.00E-17 view data
SRA807566 SRS4031561 Lung 25 Gamma delta T cells 4.05E-6 9.80E-4 view data
SRA621638 SRS2610283 Bone marrow 7 Gamma delta T cells 1.59E-23 2.45E-20 view data
SRA779509 SRS3805265 Bone marrow 4 Gamma delta T cells 3.63E-26 7.31E-23 view data
SRA768499 SRS3744982 NK cells from blood 0 Gamma delta T cells 5.04E-15 2.14E-12 view data
SRA768499 SRS3744982 NK cells from blood 1 Gamma delta T cells 2.69E-13 7.61E-11 view data
SRA768499 SRS3744982 NK cells from blood 3 Gamma delta T cells 8.13E-16 6.91E-13 view data
SRA768499 SRS3744982 NK cells from blood 4 Gamma delta T cells 2.97E-6 2.29E-4 view data
SRA779509 SRS3805248 Bone marrow 6 Gamma delta T cells 4.22E-12 1.92E-9 view data
SRA779509 SRS3805255 Bone marrow 3 Gamma delta T cells 7.61E-25 1.48E-21 view data
SRA779509 SRS3805256 Bone marrow 1 Gamma delta T cells 3.98E-26 5.95E-23 view data
SRA658915 SRS2944115 Heart 7 Gamma delta T cells 8.24E-6 6.45E-3 view data
SRA749327 SRS3693910 PBMC 0 Gamma delta T cells 1.06E-27 1.81E-24 view data
SRA749327 SRS3693910 PBMC 6 Gamma delta T cells 1.38E-22 1.18E-19 view data
SRA638923 SRS2960038 Pancreas 10 Gamma delta T cells 1.68E-6 4.36E-4 view data
SRA719952 SRS3407249 NK cells 0 Gamma delta T cells 6.41E-15 5.26E-13 view data
SRA719952 SRS3407249 NK cells 1 Gamma delta T cells 5.40E-26 1.81E-22 view data
SRA719952 SRS3407249 NK cells 2 Gamma delta T cells 4.32E-21 1.32E-18 view data
SRA719952 SRS3407249 NK cells 7 Gamma delta T cells 5.56E-20 8.50E-18 view data
SRA719952 SRS3407249 NK cells 8 Gamma delta T cells 3.73E-21 1.26E-18 view data
SRA719952 SRS3407249 NK cells 9 Gamma delta T cells 4.12E-20 6.59E-18 view data
SRA719952 SRS3407249 NK cells 10 Gamma delta T cells 1.46E-20 2.73E-18 view data
SRA719952 SRS3407249 NK cells 12 Gamma delta T cells 6.25E-19 6.78E-17 view data
SRA719952 SRS3407249 NK cells 13 Gamma delta T cells 6.44E-21 1.57E-18 view data
SRA719952 SRS3407249 NK cells 14 Gamma delta T cells 1.21E-20 2.54E-18 view data
SRA719952 SRS3407249 NK cells 15 Gamma delta T cells 3.07E-22 1.47E-19 view data
SRA719952 SRS3407249 NK cells 17 Gamma delta T cells 1.50E-14 1.20E-12 view data
SRA636225 SRS2737287 Circulating tumor cells in hepatocellular carcinoma 4 Gamma delta T cells 2.81E-25 3.91E-22 view data
SRA768499 SRS3744981 NK cells from blood 1 Gamma delta T cells 2.81E-16 6.04E-14 view data
SRA768499 SRS3744981 NK cells from blood 2 Gamma delta T cells 5.37E-20 4.62E-17 view data
SRA779509 SRS3805258 Bone marrow 5 Gamma delta T cells 2.10E-27 3.15E-24 view data
SRA768499 SRS3744983 NK cells from blood 0 Gamma delta T cells 3.20E-21 3.32E-18 view data
SRA768499 SRS3744983 NK cells from blood 1 Gamma delta T cells 3.57E-17 7.40E-15 view data
SRA768499 SRS3744983 NK cells from blood 2 Gamma delta T cells 1.59E-19 5.52E-17 view data
SRA768499 SRS3744983 NK cells from blood 3 Gamma delta T cells 6.72E-18 1.74E-15 view data
SRA768499 SRS3744983 NK cells from blood 4 Gamma delta T cells 1.69E-11 1.75E-9 view data
SRA768499 SRS3744980 NK cells from spleen 0 Gamma delta T cells 8.44E-22 8.81E-19 view data
SRA768499 SRS3744980 NK cells from spleen 2 Gamma delta T cells 3.83E-20 7.99E-18 view data
SRA768499 SRS3744980 NK cells from spleen 3 Gamma delta T cells 4.25E-16 6.31E-14 view data
SRA768499 SRS3744980 NK cells from spleen 5 Gamma delta T cells 5.97E-21 1.56E-18 view data
SRA621638 SRS2610285 Bone marrow 0 Gamma delta T cells 4.16E-23 1.78E-20 view data
SRA621638 SRS2610285 Bone marrow 1 Gamma delta T cells 8.02E-24 6.85E-21 view data