This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).
Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CETVote(s) | Species | Official gene symbol | UI | Sensitivity (human) | Sensitivity (mouse) | Specificity (human) | Specificity (mouse) | Marker count | Cell type | Germ layer | Organ | Aliases | Product description | Disease | Action | |||
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Mm Hs | OSR1 | 0.011 | 0 | 1 | 0.002 | 0.013 | 2 | Kidney progenitor cells | Mesoderm | Kidney | odd-skipped related transciption factor 1 | flag | |||||
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Mm Hs | PAX2 | 0.002 | 1 | 0.75 | 0.003 | 0.001 | 3 | Kidney progenitor cells | Mesoderm | Kidney | paired box 2 | Y | flag | ||||
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Mm Hs | EYA1 | 0.001 | 1 | 0.75 | 0.001 | 0.001 | 1 | Kidney progenitor cells | Mesoderm | Kidney | EYA transcriptional coactivator and phosphatase 1 | Y | flag | ||||
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Mm Hs | WT1 | 0.01 | 1 | 0 | 0.022 | 0 | 10 | Kidney progenitor cells | Mesoderm | Kidney | WIT-2,AWT1,NPHS4,GUD | Wilms tumor 1 | Y | flag | |||
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Mm Hs | SIX2 | 0.001 | 0 | 0 | 0.002 | 0 | 2 | Kidney progenitor cells | Mesoderm | Kidney | SIX homeobox 2 | flag | |||||
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Mm Hs | SALL1 | 0.004 | 0 | 0 | 0 | 0 | 2 | Kidney progenitor cells | Mesoderm | Kidney | Hsal1,ZNF794,TBS | spalt like transcription factor 1 | Y | flag | |||
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Mm Hs | CITED1 | 0.023 | 1 | 1 | 0.016 | 0.024 | 3 | Kidney progenitor cells | Mesoderm | Kidney | MSG1 | Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 | flag |
SRA | SRS | tissue | cluster | cell type | p-value | FDR | View |
---|---|---|---|---|---|---|---|
SRA615504 | SRS2553348 | Kidney | 6 | Kidney progenitor cells | 1.13E-6 | 1.91E-3 | view data |
SRA615504 | SRS2553349 | Kidney | 7 | Kidney progenitor cells | 4.65E-5 | 3.04E-2 | view data |
SRA757817 | SRS3666498 | Embryonic kidney | 9 | Kidney progenitor cells | 8.27E-7 | 4.98E-4 | view data |
SRA757817 | SRS3666495 | Embryonic kidney | 6 | Kidney progenitor cells | 8.57E-6 | 3.92E-3 | view data |
SRA705190 | SRS4139635 | Embryonic kidney | 6 | Kidney progenitor cells | 6.67E-5 | 2.31E-2 | view data |