Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

Filter

get tsv file add marker

Gene expression markers for Meningeal cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs IGFBP2 0.129 0 1 0.163 0.116 1 Meningeal cells Ectoderm Brain IBP2 insulin like growth factor binding protein 2 flag
0
Mm Hs SLC47A1 0.002 0 0 0 0 2 Meningeal cells Ectoderm Brain FLJ10847,MATE1 solute carrier family 47 member 1 flag
0
Mm Hs NOV 0.004 0 0.154 0.005 0.005 5 Meningeal cells Ectoderm Brain IGFBP9,CCN3 nephroblastoma overexpressed flag
0
Mm Hs NNAT 0.229 0 0.692 0.046 0.276 2 Meningeal cells Ectoderm Brain Peg5 neuronatin flag
0
Mm Hs PTGDS 0.054 0 1 0.058 0.054 10 Meningeal cells Ectoderm Brain L-PGDS prostaglandin D2 synthase flag
0
Mm Hs IL33 0.018 0 0 0.011 0.021 6 Meningeal cells Ectoderm Brain DVS27,DKFZp586H0523,NF-HEV,IL1F11,C9orf26 interleukin 33 flag
0
Mm Hs PDGFRA 0.044 0 0.077 0.048 0.044 6 Meningeal cells Ectoderm Brain CD140a,PDGFR2,GAS9 platelet derived growth factor receptor alpha Yflag
0
Mm Hs LUM 0.051 0 0.154 0.087 0.043 4 Meningeal cells Ectoderm Brain SLRR2D,LDC lumican flag
0
Mm Hs DCN 0.084 0 0.846 0.107 0.081 3 Meningeal cells Ectoderm Brain DSPG2,SLRR1B decorin Yflag
0
Mm Hs FOXC1 0.015 0 0.462 0.007 0.017 3 Meningeal cells Ectoderm Brain FREAC3,IGDA,IHG1,FKHL7,IRID1 forkhead box C1 Yflag
0
Mm Hs VTN 0.029 0 0 0.01 0 4 Meningeal cells Ectoderm Brain VN vitronectin flag
0
Mm Hs IGF2 0.013 0 0 0.046 0.001 8 Meningeal cells Ectoderm Brain FLJ44734,IGF-II,C11orf43 insulin like growth factor 2 Yflag
0
Mm Hs ALX4 0 0 0 0 0 1 Meningeal cells Ectoderm Brain KIAA1788 ALX homeobox 4 Yflag
0
Mm Hs ALDH1A2 0.011 0 0.692 0.025 0.008 2 Meningeal cells Ectoderm Brain RALDH2 aldehyde dehydrogenase 1 family member A2 flag
0
Mm Hs ZIC3 0.01 0 0 0.001 0 2 Meningeal cells Ectoderm Brain HTX,ZNF203,HTX1 Zic family member 3 Yflag
0
Mm Hs ZIC1 0.046 0 0 0.008 0 4 Meningeal cells Ectoderm Brain ZIC,ZNF201 Zic family member 1 Yflag
0
Mm Hs BMP7 0.01 0 0.615 0.006 0.009 2 Meningeal cells Ectoderm Brain OP-1 bone morphogenetic protein 7 flag
0
Mm Hs FOXC2 0.003 0 0.154 0.008 0.002 3 Meningeal cells Ectoderm Brain MFH-1,FKHL14 forkhead box C2 Yflag

Datasets with computationally identified Meningeal cells

SRA SRS tissue cluster cell type p-value FDR View
SRA667466 SRS3060037 Dorsal midbrain 16 Meningeal cells 9.67E-5 1.23E-2 view data
SRA667466 SRS3060009 Dorsal midbrain 13 Meningeal cells 2.05E-4 1.98E-2 view data
SRA800102 SRS3990030 Olfactory bulb 15 Meningeal cells 4.03E-5 1.02E-2 view data
SRA800102 SRS3990021 Olfactory bulb 16 Meningeal cells 1.47E-5 3.77E-3 view data
SRA667466 SRS3060014 Dorsal midbrain 14 Meningeal cells 1.35E-4 1.20E-2 view data
SRA667466 SRS3060002 Olfactory bulb? 15 Meningeal cells 1.05E-4 1.57E-2 view data
SRA667466 SRS3060063 Olfactory bulb 16 Meningeal cells 9.19E-5 1.43E-2 view data
SRA800102 SRS3990018 Olfactory bulb 14 Meningeal cells 5.42E-5 1.04E-2 view data
SRA800102 SRS3990018 Olfactory bulb 18 Meningeal cells 6.64E-6 1.80E-3 view data
SRA667466 SRS3060011 Dorsal midbrain 13 Meningeal cells 5.25E-5 5.14E-3 view data
SRA667466 SRS3060071 Cortex 3 21 Meningeal cells 8.06E-4 4.21E-2 view data
SRA800102 SRS3990017 Olfactory bulb 17 Meningeal cells 1.08E-6 2.88E-4 view data
SRA800102 SRS3990017 Olfactory bulb 22 Meningeal cells 6.80E-5 1.21E-2 view data