Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: Mesothelial cells form a monolayer of specialised pavement-like cells that line the body's serous cavities and internal organs.

Gene expression markers for Mesothelial cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
2
Mm Hs CDH1 0.056 0 0 0.042 0.057 15 Mesothelial cells Mesoderm Epithelium uvomorulin,CD324,UVO cadherin 1 Yflag
2
Mm Hs FGF1 0.011 0 0.233 0.003 0.012 4 Mesothelial cells Mesoderm Epithelium AFGF,ECGF,ECGFA,ECGFB,HBGF1,ECGF-beta,FGF-alpha,GLIO703,FGFA fibroblast growth factor 1 flag
2
Mm Hs MSLN 0.004 1 0.967 0.001 0.003 2 Mesothelial cells Mesoderm Epithelium MPF mesothelin flag
1
Mm Hs CALB2 0.03 1 0 0.002 0.038 8 Mesothelial cells Mesoderm Epithelium CAL2 calbindin 2 flag
1
Mm Hs ADGRD1 0.004 0 0.267 0.007 0.003 1 Mesothelial cells Mesoderm Epithelium DKFZp434B1272,PGR25,GPR133 adhesion G protein-coupled receptor D1 flag
1
Mm Hs DPP4 0.02 0 0.633 0.013 0.02 9 Mesothelial cells Mesoderm Epithelium CD26,ADCP2 dipeptidyl peptidase 4 flag
0
Mm Hs ANO1 0.009 0 0.467 0.001 0.011 2 Mesothelial cells Mesoderm Epithelium TAOS2,FLJ10261,DOG1,ORAOV2,TMEM16A anoctamin 1 flag
0
Mm Hs CRLS1 0.022 1 0.6 0.051 0.011 1 Mesothelial cells Mesoderm Epithelium dJ967N21.6,CLS1,C20orf155 cardiolipin synthase 1 flag
0
Mm GSTT1 0.022 0 0.4 0 0.027 4 Mesothelial cells Mesoderm Epithelium glutathione S-transferase theta 1 flag
0
Mm Hs LGALS7 0.016 0 0.533 0.003 0.018 2 Mesothelial cells Mesoderm Epithelium TP53I1,LGALS7A galectin 7 flag
0
Mm Hs AR 0.013 0 0.267 0.002 0.015 6 Mesothelial cells Mesoderm Epithelium AIS,NR3C4,SMAX1,HUMARA,DHTR,SBMA androgen receptor Yflag
0
Mm Hs MEDAG 0.007 1 0.1 0.009 0.006 2 Mesothelial cells Mesoderm Epithelium FLJ14834,AWMS3,MEDA-4,C13orf33 mesenteric estrogen dependent adipogenesis flag
0
Mm C1RA 0.015 0 0.633 0 0.018 1 Mesothelial cells Mesoderm Epithelium complement component 1, r subcomponent A flag
0
Mm Hs GBP2 0.02 0.5 0.567 0.039 0.015 1 Mesothelial cells Mesoderm Epithelium guanylate binding protein 2 flag
0
Mm Hs RND1 0.007 0 0 0.005 0 2 Mesothelial cells Mesoderm Epithelium Rho6,ARHS,RHOS Rho family GTPase 1 flag
0
Mm Hs PCSK6 0.007 0 0.1 0 0.008 3 Mesothelial cells Mesoderm Epithelium SPC4,PACE4 proprotein convertase subtilisin/kexin type 6 flag
0
Mm Hs NPR1 0.009 0 0.2 0.002 0.011 4 Mesothelial cells Mesoderm Epithelium GUCY2A,ANPa,ANPRA,NPRA natriuretic peptide receptor 1 flag
0
Mm Hs GSTA3 0.014 0 0.567 0.001 0.016 1 Mesothelial cells Mesoderm Epithelium glutathione S-transferase alpha 3 flag
0
Mm Hs ACKR3 0.01 0 0.1 0.007 0.011 5 Mesothelial cells Mesoderm Epithelium GPR159,CMKOR1,CXCR7 atypical chemokine receptor 3 flag
0
Mm Hs FLNC 0.01 0 0.067 0.003 0.01 3 Mesothelial cells Mesoderm Epithelium ABPL,FLN2 filamin C Yflag
0
Mm Hs PTGS2 0.009 0 0.067 0.014 0.008 4 Mesothelial cells Mesoderm Epithelium prostaglandin-endoperoxide synthase 2 flag
0
Mm Hs C2 0.008 0 0.8 0.007 0.007 2 Mesothelial cells Mesoderm Epithelium complement C2 Yflag
0
Mm Hs FMO2 0.014 0 0.567 0.004 0.015 2 Mesothelial cells Mesoderm Epithelium flavin containing monooxygenase 2 flag
0
Mm Hs FMOD 0.009 0 0.533 0.006 0.008 2 Mesothelial cells Mesoderm Epithelium SLRR2E fibromodulin flag
0
Mm TRIM30C 0.001 NA NA NA NA 1 Mesothelial cells Mesoderm Epithelium tripartite motif-containing 30C flag
0
Mm Hs EFEMP1 0.021 1 0.9 0.041 0.015 2 Mesothelial cells Mesoderm Epithelium S1-5,FBLN3,MTLV,DHRD,FBNL EGF containing fibulin extracellular matrix protein 1 Yflag
0
Mm Hs FRAS1 0.003 0 0.2 0.002 0.002 1 Mesothelial cells Mesoderm Epithelium FLJ22031,FLJ14927,KIAA1500 Fraser extracellular matrix complex subunit 1 Yflag
0
Mm Hs RSPO1 0.007 1 0 0 0 1 Mesothelial cells Mesoderm Epithelium FLJ40906,RSPONDIN R-spondin 1 Yflag
0
Mm Hs RARRES2 0.03 1 0 0.078 0 7 Mesothelial cells Mesoderm Epithelium TIG2,HP10433 retinoic acid receptor responder 2 flag
0
Mm Hs CDON 0.005 0 0.4 0 0.006 2 Mesothelial cells Mesoderm Epithelium ORCAM,CDO,CDON1 cell adhesion associated, oncogene regulated Yflag
0
Mm Hs MUC16 0.001 1 0.4 0.002 0 3 Mesothelial cells Mesoderm Epithelium FLJ14303 mucin 16, cell surface associated flag
0
Mm Hs KRT5 0.019 1 0 0.044 0.015 6 Mesothelial cells Mesoderm Epithelium KRT5A,EBS2 keratin 5 Yflag
0
Mm Hs KRT6A 0.007 0 0 0.011 0.007 1 Mesothelial cells Mesoderm Epithelium CK6C,K6C,CK6D,K6D,KRT6C,KRT6D keratin 6A Yflag
0
Mm Hs DES 0.021 0 0.067 0.009 0.023 11 Mesothelial cells Mesoderm Epithelium CMD1I,CSM1,CSM2 desmin Yflag
0
Mm Hs HAS2 0.003 0 0 0.012 0.001 1 Mesothelial cells Mesoderm Epithelium hyaluronan synthase 2 flag
0
Mm Hs KRT7 0.056 1 0.733 0.101 0.046 9 Mesothelial cells Mesoderm Epithelium CK7,K2C7 keratin 7 flag
0
Mm Hs ME1 0.031 0 0 0.006 0.037 2 Mesothelial cells Mesoderm Epithelium malic enzyme 1 flag
0
Mm Hs ME2 0.043 0 0 0.027 0.046 1 Mesothelial cells Mesoderm Epithelium malic enzyme 2 flag
0
Mm Hs THBD 0.022 0 0 0.013 0 3 Mesothelial cells Mesoderm Epithelium CD141 thrombomodulin Yflag
0
Mm Hs WT1 0.01 1 0 0.022 0 10 Mesothelial cells Mesoderm Epithelium WIT-2,AWT1,NPHS4,GUD Wilms tumor 1 Yflag
0
Mm Hs LRRN4 0.002 0 0.933 0 0 1 Mesothelial cells Mesoderm Epithelium dJ1056H1.1,NLRR4,C20orf75 leucine rich repeat neuronal 4 flag
0
Mm Hs IL17RE 0.003 0 0.133 0.001 0.003 1 Mesothelial cells Mesoderm Epithelium FLJ23658 interleukin 17 receptor E flag
0
Mm Hs LOX 0.017 0 0.333 0.015 0.016 9 Mesothelial cells Mesoderm Epithelium lysyl oxidase flag
0
Mm OASL2 0.011 0 0.2 0 0.013 1 Mesothelial cells Mesoderm Epithelium 2'-5' oligoadenylate synthetase-like 2 flag
0
Mm Hs KCNAB1 0.006 0 0.067 0 0.007 2 Mesothelial cells Mesoderm Epithelium AKR6A3,KCNA1B,hKvBeta3,Kvb1.3,hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 flag
0
Mm Hs PKHD1L1 0.001 1 0.467 0.001 0 1 Mesothelial cells Mesoderm Epithelium PKHD1 like 1 flag
0
Mm Hs SULF1 0.013 1 0 0.017 0 4 Mesothelial cells Mesoderm Epithelium KIAA1077,SULF-1,hSulf-1 sulfatase 1 flag
0
Mm Hs DUSP5 0.032 0 0.067 0.05 0.028 2 Mesothelial cells Mesoderm Epithelium HVH3 dual specificity phosphatase 5 flag
0
Mm Hs MIR22HG 0.021 1 0.1 0.033 0.019 1 Mesothelial cells Mesoderm Epithelium MGC14376,DKFZp686O06159,C17orf91 MIR22 host gene flag
0
Mm Hs COBLL1 0.013 1 0.167 0.017 0.012 1 Mesothelial cells Mesoderm Epithelium KIAA0977 cordon-bleu WH2 repeat protein like 1 flag
0
Mm Hs ST3GAL1 0.013 0 0 0.016 0 1 Mesothelial cells Mesoderm Epithelium ST3O,SIATFL,ST3GalA.1,SIAT4A ST3 beta-galactoside alpha-2,3-sialyltransferase 1 flag
0
Mm Hs FBXO33 0.008 0 0.1 0.012 0.007 1 Mesothelial cells Mesoderm Epithelium Fbx33 F-box protein 33 flag
0
Mm Hs FZD1 0.01 0 0.1 0.003 0.012 3 Mesothelial cells Mesoderm Epithelium DKFZp564G072 frizzled class receptor 1 flag
0
Mm Hs RASL11A 0.012 0 0 0 0 1 Mesothelial cells Mesoderm Epithelium RAS like family 11 member A flag
0
Mm Hs BCL3 0.012 0 0.033 0.009 0.013 2 Mesothelial cells Mesoderm Epithelium D19S37,BCL4 B cell CLL/lymphoma 3 flag
-1
Mm Hs TWSG1 0.02 0 0 0.03 0 1 Mesothelial cells Mesoderm Epithelium TSG twisted gastrulation BMP signaling modulator 1 flag
-1
Mm MMP23 0.012 0 0.633 0 0.014 2 Mesothelial cells Mesoderm Epithelium matrix metallopeptidase 23 flag
-1
Mm Hs OSR1 0.011 0 0.367 0.002 0.012 2 Mesothelial cells Mesoderm Epithelium odd-skipped related transciption factor 1 flag

Datasets with computationally identified Mesothelial cells

SRA SRS tissue cluster cell type p-value FDR View
SRA611634 SRS2532205 Lung 9 Mesothelial cells 6.27E-15 4.16E-12 view data
SRA832392 SRS4237528 Lung 6 Mesothelial cells 2.77E-7 4.81E-5 view data
SRA599311 SRS2431649 Mesenteric 8 Mesothelial cells 0.00E+0 8.27E-44 view data
SRA628029 SRS2658205 Mesenteric lymph nodes 13 Mesothelial cells 3.57E-12 2.36E-9 view data
SRA637291 SRS2749416 Left Ventricle 19 Mesothelial cells 1.87E-15 1.32E-12 view data
SRA753635 SRS3630214 Uterus 9 Mesothelial cells 1.25E-6 4.82E-4 view data
SRA653146 SRS3044261 Lung 13 Mesothelial cells 2.70E-15 1.01E-12 view data
SRA807566 SRS4031560 Lung 11 Mesothelial cells 1.01E-6 3.79E-4 view data
SRA640325 SRS2769051 Lung proximal airway stromal cells 18 Mesothelial cells 1.15E-8 3.13E-6 view data
SRA667466 SRS3060058 Sympathetic nervous system 18 Mesothelial cells 2.09E-5 2.68E-3 view data
SRA599311 SRS2431648 Mesenteric 1 Mesothelial cells 8.97E-30 2.36E-26 view data
SRA832392 SRS4237526 Lung 5 Mesothelial cells 1.08E-8 2.27E-6 view data
SRA658915 SRS2944108 Heart 7 Mesothelial cells 6.13E-11 1.18E-7 view data
SRA762414 SRS3703557 Heart 21 Mesothelial cells 1.76E-12 5.77E-10 view data
SRA585365 SRS3297652 Pancreas 6 Mesothelial cells 2.60E-8 1.14E-5 view data
SRA631205 SRS2690037 Pulmonary alveolar type i cells 13 Mesothelial cells 4.76E-10 1.05E-7 view data
SRA745744 SRS3600993 Whole heart 19 Mesothelial cells 1.18E-8 2.26E-6 view data
SRA753635 SRS3630213 Uterus 14 Mesothelial cells 4.38E-7 2.08E-4 view data
SRA664171 SRS3020563 Prostate basal cells 19 Mesothelial cells 9.16E-8 1.09E-4 view data
SRA832392 SRS4237523 Lung 11 Mesothelial cells 5.19E-14 2.36E-11 view data
SRA637291 SRS2749446 Left Ventricle 14 Mesothelial cells 1.21E-14 4.55E-12 view data
SRA745567 SRS3600298 Pancreatic islets 24 Mesothelial cells 3.57E-22 8.21E-19 view data
SRA837885 SRS4281822 Gonadal adipose tissue 1 Mesothelial cells 1.05E-10 2.26E-8 view data
SRA837885 SRS4281820 Lung 3 Mesothelial cells 1.90E-9 3.75E-7 view data
SRA665127 SRS3030181 White adipose tissue 7 Mesothelial cells 4.95E-29 8.66E-26 view data
SRA658915 SRS2944114 Heart 10 Mesothelial cells 2.11E-8 4.44E-5 view data
SRA784304 SRS3823098 Pancreatic progenitor cells 6 Mesothelial cells 5.28E-13 4.11E-10 view data
SRA745744 SRS3600992 Whole heart 21 Mesothelial cells 9.42E-12 2.74E-9 view data
SRA585365 SRS3297651 Pancreas 5 Mesothelial cells 2.79E-7 8.83E-5 view data
SRA837885 SRS4281821 Lung 3 Mesothelial cells 1.18E-9 2.60E-7 view data
SRA640325 SRS2769050 Lung distal alveolar stromal cells 17 Mesothelial cells 4.14E-8 8.55E-6 view data
SRA570744 SRS2253536 Lung mesenchyme 5 Mesothelial cells 3.69E-8 1.51E-5 view data