Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

Filter

get tsv file add marker
Description: An undifferentiated cell in the mesoderm of the vertebrate embryo that is a precursor of a muscle cell.

Gene expression markers for Myoblasts

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
2
Mm Hs MYOD1 0.004 0 0.714 0.001 0.003 3 Myoblasts Mesoderm Skeletal muscle MYOD,bHLHc1,MYF3 myogenic differentiation 1 flag
1
Mm Hs MYF5 0.001 0 1 0 0.001 3 Myoblasts Mesoderm Skeletal muscle bHLHc2 myogenic factor 5 flag
0
Mm Hs TNFRSF12A 0.084 0 0 0.151 0 2 Myoblasts Mesoderm Skeletal muscle FN14,TweakR,CD266 TNF receptor superfamily member 12A flag
0
Mm Hs TTN 0.007 0 0 0.011 0 3 Myoblasts Mesoderm Skeletal muscle CMPD4,FLJ32040,TMD,CMH9,LGMD2J,MYLK5,CMD1G titin Yflag
0
Mm Hs MUSK 0.002 0 0.929 0 0.002 1 Myoblasts Mesoderm Skeletal muscle muscle associated receptor tyrosine kinase Yflag
0
Mm Hs FLNC 0.01 0 0.571 0.003 0.01 3 Myoblasts Mesoderm Skeletal muscle ABPL,FLN2 filamin C Yflag
0
Mm Hs FGFR4 0.003 0 0.857 0.003 0.001 3 Myoblasts Mesoderm Skeletal muscle JTK2,CD334 fibroblast growth factor receptor 4 Yflag
0
Mm Hs STK40 0.015 0 0 0.021 0 1 Myoblasts Mesoderm Skeletal muscle MGC4796,SgK495 serine/threonine kinase 40 flag
0
Mm Hs CXCL1 0.032 0 0.643 0.046 0.03 8 Myoblasts Mesoderm Skeletal muscle SCYB1,GROa,MGSA-a,NAP-3,MGSA,GRO1,FSP C-X-C motif chemokine ligand 1 flag
0
Mm Hs PAX7 0.001 0 0.5 0.001 0 5 Myoblasts Mesoderm Skeletal muscle Hup1 paired box 7 Yflag
0
Mm Hs ARL4D 0.014 0 0.5 0.036 0.008 2 Myoblasts Mesoderm Skeletal muscle ARF4L ADP ribosylation factor like GTPase 4D flag
0
Mm Hs CCL2 0.037 0 0.071 0.065 0.032 6 Myoblasts Mesoderm Skeletal muscle MCP1,MCP-1,MCAF,SMC-CF,GDCF-2,HC11,MGC9434,SCYA2 C-C motif chemokine ligand 2 Yflag
0
Mm Hs MYD88 0.013 0 0.143 0.009 0.014 1 Myoblasts Mesoderm Skeletal muscle myeloid differentiation primary response 88 Yflag
0
Mm Hs BRAF 0.025 0 0.071 0.016 0.028 3 Myoblasts Mesoderm Skeletal muscle BRAF1 B-Raf proto-oncogene, serine/threonine kinase Yflag
0
Mm Hs EGFR 0.014 0 0.286 0.022 0.013 8 Myoblasts Mesoderm Skeletal muscle ERBB1,ERBB epidermal growth factor receptor Yflag
0
Mm Hs ZBTB16 0.007 0 0 0.012 0 4 Myoblasts Mesoderm Skeletal muscle PLZF,ZNF145 zinc finger and BTB domain containing 16 Yflag
0
Mm Hs SIX1 0.014 0 0 0.027 0 3 Myoblasts Mesoderm Skeletal muscle DFNA23 SIX homeobox 1 Yflag
0
Mm Hs PDZRN3 0.003 0 0 0.002 0.003 1 Myoblasts Mesoderm Skeletal muscle KIAA1095,SEMACAP3,LNX3 PDZ domain containing ring finger 3 flag
0
Mm Hs TBX3 0.024 0 0 0.03 0 2 Myoblasts Mesoderm Skeletal muscle TBX3-ISO,XHL,UMS T-box 3 Yflag
0
Mm Hs MYOG 0.002 0 0.071 0 0.002 2 Myoblasts Mesoderm Skeletal muscle bHLHc3,MYF4 myogenin flag
0
Mm Hs PAX3 0.004 0 0 0.004 0.004 4 Myoblasts Mesoderm Skeletal muscle HUP2,WS1 paired box 3 Yflag
0
Mm Hs MYF6 0 0 0 0 0 3 Myoblasts Mesoderm Skeletal muscle MRF4,bHLHc4 myogenic factor 6 Yflag
0
Mm Hs CAPN1 0.018 0 0 0.048 0.011 3 Myoblasts Mesoderm Skeletal muscle muCANP,muCL,CANPL1 calpain 1 flag
0
Mm Hs CDH15 0.003 0 0.714 0.002 0.002 3 Myoblasts Mesoderm Skeletal muscle CDH3 cadherin 15 Yflag
0
Mm Hs DES 0.021 0 1 0.009 0.022 11 Myoblasts Mesoderm Skeletal muscle CMD1I,CSM1,CSM2 desmin Yflag
0
Mm Hs ENO3 0.01 0 0.143 0 0.011 4 Myoblasts Mesoderm Skeletal muscle enolase 3 Yflag
0
Mm Hs TPM2 0.075 0 0 0.147 0 5 Myoblasts Mesoderm Skeletal muscle NEM4,AMCD1 tropomyosin 2 Yflag
0
Mm Hs ADAM12 0.007 0 0 0.006 0.008 3 Myoblasts Mesoderm Skeletal muscle MCMPMltna,MLTN ADAM metallopeptidase domain 12 flag
0
Mm Hs ACHE 0.016 0 0 0.005 0.02 6 Myoblasts Mesoderm Skeletal muscle YT acetylcholinesterase (Cartwright blood group) Yflag
0
Mm Hs ANGPT2 0.004 0 0 0.016 0.002 3 Myoblasts Mesoderm Skeletal muscle Ang2 angiopoietin 2 flag
0
Mm Hs IGF2 0.013 0 0.071 0.046 0.001 8 Myoblasts Mesoderm Skeletal muscle FLJ44734,IGF-II,C11orf43 insulin like growth factor 2 Yflag
0
Mm Hs NGF 0.003 0 0 0.001 0.003 3 Myoblasts Mesoderm Skeletal muscle NGFB nerve growth factor Yflag
0
Mm Hs LIF 0.002 0 0 0.005 0.001 3 Myoblasts Mesoderm Skeletal muscle CDF,HILDA LIF, interleukin 6 family cytokine flag

Datasets with computationally identified Myoblasts

SRA SRS tissue cluster cell type p-value FDR View
SRA868105 SRS4566019 Hind limb muscles 3 Myoblasts 3.95E-5 1.29E-2 view data
SRA653146 SRS2874285 Trachea 19 Myoblasts 2.98E-7 2.70E-5 view data
SRA653146 SRS2874279 Muscle 1 Myoblasts 1.36E-6 1.47E-4 view data
SRA653146 SRS2874279 Muscle 3 Myoblasts 1.88E-7 2.28E-5 view data
SRA653146 SRS2874279 Muscle 4 Myoblasts 1.76E-9 2.96E-7 view data
SRA653146 SRS2874279 Muscle 5 Myoblasts 1.46E-11 2.97E-9 view data
SRA653146 SRS2874279 Muscle 7 Myoblasts 1.07E-8 1.55E-6 view data
SRA653146 SRS3044259 Muscle 3 Myoblasts 5.38E-7 9.93E-5 view data
SRA653146 SRS3044258 Muscle 5 Myoblasts 1.22E-7 2.16E-5 view data
SRA868105 SRS4566017 Hind limb muscles 1 Myoblasts 2.38E-5 6.02E-3 view data
SRA868105 SRS4566017 Hind limb muscles 2 Myoblasts 4.96E-6 1.57E-3 view data
SRA868105 SRS4566017 Hind limb muscles 4 Myoblasts 2.91E-5 6.02E-3 view data
SRA868105 SRS4566017 Hind limb muscles 6 Myoblasts 3.04E-5 6.02E-3 view data
SRA868105 SRS4566017 Hind limb muscles 7 Myoblasts 3.21E-4 4.63E-2 view data