Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

Filter

get tsv file add marker

Gene expression markers for Myofibroblasts

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
2
Mm Hs ACTA2 0.035 0 1 0.019 0.039 9 Myofibroblasts Mesoderm Smooth muscle ACTSA actin, alpha 2, smooth muscle, aorta Yflag
1
Mm Hs DES 0.021 0 0.5 0.009 0.023 11 Myofibroblasts Mesoderm Smooth muscle CMD1I,CSM1,CSM2 desmin Yflag
0
Mm Hs PALLD 0.053 0 0.333 0.102 0.042 3 Myofibroblasts Mesoderm Smooth muscle KIAA0992,SIH002,CGI-151 palladin, cytoskeletal associated protein Yflag
0
Mm Hs GFAP 0.013 0 0 0.006 0.015 11 Myofibroblasts Mesoderm Smooth muscle FLJ45472 glial fibrillary acidic protein Yflag
0
Mm Hs TNS1 0.047 0 0 0.015 0 2 Myofibroblasts Mesoderm Smooth muscle DKFZp586K0617,PPP1R155,TNS,MXRA6 tensin 1 flag
0
Mm Hs CALD1 0.186 0 1 0.269 0.165 3 Myofibroblasts Mesoderm Smooth muscle H-CAD,L-CAD caldesmon 1 flag
0
Mm Hs MYL9 0.081 0 1 0.16 0.063 7 Myofibroblasts Mesoderm Smooth muscle MYRL2,MLC2,LC20,MRLC1 myosin light chain 9 flag
0
Mm Hs TAGLN 0.01 0 0 0.001 0 4 Myofibroblasts Mesoderm Smooth muscle SM22,WS3-10,TAGLN1,DKFZp686P11128 transgelin flag
-1
Mm Hs CDH11 0.039 0 0.5 0.052 0.036 3 Myofibroblasts Mesoderm Smooth muscle CAD11 cadherin 11 flag

Datasets with computationally identified Myofibroblasts

SRA SRS tissue cluster cell type p-value FDR View
SRA758635 SRS3670039 Lung 0 Myofibroblasts 1.97E-4 2.99E-2 view data
SRA758635 SRS3670039 Lung 1 Myofibroblasts 1.02E-4 1.78E-2 view data
SRA658915 SRS2944113 Heart 3 Myofibroblasts 6.93E-5 2.70E-2 view data
SRA631205 SRS2690037 Pulmonary alveolar type i cells 9 Myofibroblasts 7.28E-6 9.60E-4 view data
SRA807566 SRS4031561 Lung 14 Myofibroblasts 2.20E-5 3.90E-3 view data
SRA745740 SRS3600988 Mouse embryonic fibroblasts 10 Myofibroblasts 3.10E-5 2.20E-2 view data