Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: A type of smooth muscle cell which surrounds the seminiferous tubules in the testis.

Gene expression markers for Peritubular myoid cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs LAMC3 0.002 0.321 0 0.003 0.001 1 Peritubular myoid cells Mesoderm Reproductive DKFZp434E202 laminin subunit gamma 3 Yflag
0
Mm Hs WNT2B 0.001 0.132 0 0.004 0 1 Peritubular myoid cells Mesoderm Reproductive XWNT2,WNT13 Wnt family member 2B flag
0
WNT 0 NA NA NA NA 1 Peritubular myoid cells Mesoderm Reproductive flag
0
Mm Hs MYL9 0.081 0.811 0 0.149 0.063 7 Peritubular myoid cells Mesoderm Reproductive MYRL2,MLC2,LC20,MRLC1 myosin light chain 9 flag
0
Mm Hs TPM4 0.311 0.358 0 0.344 0 1 Peritubular myoid cells Mesoderm Reproductive tropomyosin 4 flag
0
Mm Hs TPM2 0.075 0.434 0 0.142 0 5 Peritubular myoid cells Mesoderm Reproductive NEM4,AMCD1 tropomyosin 2 Yflag
0
Mm Hs TPM1 0.253 0.34 0 0.176 0 2 Peritubular myoid cells Mesoderm Reproductive C15orf13,CMH3 tropomyosin 1 Yflag
0
Mm Hs MYH11 0.015 0.34 0 0.011 0.015 6 Peritubular myoid cells Mesoderm Reproductive SMMHC,SMHC myosin heavy chain 11 Yflag
0
Mm Hs LAMB2 0.019 0.094 0 0.012 0.021 4 Peritubular myoid cells Mesoderm Reproductive NPHS5,LAMS laminin subunit beta 2 Yflag
0
Mm Hs COL15A1 0.016 0.453 0 0.021 0.014 3 Peritubular myoid cells Mesoderm Reproductive collagen type XV alpha 1 chain flag
0
Mm Hs C7 0.003 0.189 0 0.012 0.001 2 Peritubular myoid cells Mesoderm Reproductive complement C7 Yflag
0
Mm Hs OSR2 0.011 0.528 0 0.009 0.009 2 Peritubular myoid cells Mesoderm Reproductive FLJ90037 odd-skipped related transciption factor 2 flag
0
Mm Hs EPHX1 0.02 0.302 0 0.035 0.016 1 Peritubular myoid cells Mesoderm Reproductive EPHX epoxide hydrolase 1 Yflag
0
Mm Hs ALDH1A3 0.008 0.075 0 0.034 0.003 5 Peritubular myoid cells Mesoderm Reproductive RALDH3,ALDH6 aldehyde dehydrogenase 1 family member A3 Yflag
0
Mm Hs RASD1 0.013 0.396 0 0.026 0 2 Peritubular myoid cells Mesoderm Reproductive DEXRAS1 ras related dexamethasone induced 1 flag
0
Mm Hs CILP 0.003 0.075 0 0.003 0.003 1 Peritubular myoid cells Mesoderm Reproductive HsT18872 cartilage intermediate layer protein Yflag
0
Mm Hs RNASE1 0.022 0.509 0 0.083 0 3 Peritubular myoid cells Mesoderm Reproductive RAC1,RNS1 ribonuclease A family member 1, pancreatic flag
0
Mm Hs GSTM3 0.024 0.792 0 0.081 0.008 2 Peritubular myoid cells Mesoderm Reproductive GST5 glutathione S-transferase mu 3 flag
0
Mm Hs RARRES2 0.03 0.491 0 0.072 0 7 Peritubular myoid cells Mesoderm Reproductive TIG2,HP10433 retinoic acid receptor responder 2 flag
0
Mm Hs KCNMB1 0.004 0.396 0 0.004 0.003 2 Peritubular myoid cells Mesoderm Reproductive hslo-beta potassium calcium-activated channel subfamily M regulatory beta subunit 1 Yflag
0
Mm Hs CYP1B1 0.016 0.17 0 0.047 0.009 5 Peritubular myoid cells Mesoderm Reproductive CP1B,GLC3A cytochrome P450 family 1 subfamily B member 1 Yflag
0
Mm Hs TMEM98 0.036 0.302 0 0.121 0 1 Peritubular myoid cells Mesoderm Reproductive DKFZP564K1964 transmembrane protein 98 Yflag
0
Mm Hs MYLIP 0.02 0.302 0 0.064 0.011 1 Peritubular myoid cells Mesoderm Reproductive IDOL myosin regulatory light chain interacting protein flag
0
Mm Hs APOA1 0.032 0.491 0 0.061 0.026 5 Peritubular myoid cells Mesoderm Reproductive apolipoprotein A1 Yflag
0
Mm Hs SAT2 0.042 0.66 0 0.179 0 2 Peritubular myoid cells Mesoderm Reproductive SSAT2 spermidine/spermine N1-acetyltransferase family member 2 flag
-1
Mm Hs INTS6 0.034 0.453 0 0.112 0.017 2 Peritubular myoid cells Mesoderm Reproductive DICE1,HDB,Notchl2,DBI-1,DDX26A,DDX26 integrator complex subunit 6 flag

Datasets with computationally identified Peritubular myoid cells

SRA SRS tissue cluster cell type p-value FDR View
SRA784242 SRS3822683 Testicular cells 1 Peritubular myoid cells 5.31E-5 1.65E-2 view data
SRA784242 SRS3822683 Testicular cells 3 Peritubular myoid cells 4.07E-5 1.65E-2 view data
SRA784242 SRS3822683 Testicular cells 4 Peritubular myoid cells 1.64E-8 1.36E-5 view data
SRA826293 SRS4181126 Testis 1 Peritubular myoid cells 1.62E-6 7.95E-4 view data
SRA826293 SRS4181126 Testis 2 Peritubular myoid cells 2.42E-8 2.36E-5 view data
SRA826293 SRS4181126 Testis 4 Peritubular myoid cells 3.41E-5 1.11E-2 view data
SRA826293 SRS4181126 Testis 6 Peritubular myoid cells 5.25E-9 1.03E-5 view data
SRA826293 SRS4181126 Testis 9 Peritubular myoid cells 1.32E-6 7.95E-4 view data
SRA645804 SRS2823412 Testis 0 Peritubular myoid cells 1.61E-17 4.79E-15 view data
SRA645804 SRS2823412 Testis 15 Peritubular myoid cells 1.80E-10 3.55E-8 view data
SRA645804 SRS2823405 Testis 8 Peritubular myoid cells 1.29E-8 2.52E-5 view data
SRA667709 SRS3065430 Testicle 19 Peritubular myoid cells 2.33E-6 3.22E-4 view data
SRA645804 SRS2823408 Testis 10 Peritubular myoid cells 3.15E-13 7.59E-11 view data
SRA645804 SRS2823408 Testis 18 Peritubular myoid cells 1.13E-4 8.87E-3 view data
SRA645804 SRS2823408 Testis 20 Peritubular myoid cells 2.22E-5 2.22E-3 view data
SRA826293 SRS4181127 Testis 0 Peritubular myoid cells 4.21E-10 9.50E-8 view data
SRA826293 SRS4181127 Testis 1 Peritubular myoid cells 2.77E-14 1.56E-11 view data
SRA826293 SRS4181127 Testis 2 Peritubular myoid cells 1.20E-13 5.79E-11 view data
SRA826293 SRS4181127 Testis 4 Peritubular myoid cells 4.81E-12 1.48E-9 view data
SRA645804 SRS2823407 Testis 14 Peritubular myoid cells 3.06E-5 2.79E-3 view data
SRA646572 SRS2833947 Human embryo forebrain 23 Peritubular myoid cells 3.95E-6 3.52E-3 view data
SRA826293 SRS4181128 Testis 8 Peritubular myoid cells 3.31E-11 1.60E-8 view data
SRA826293 SRS4181130 Testis 0 Peritubular myoid cells 4.96E-5 6.87E-3 view data
SRA826293 SRS4181130 Testis 1 Peritubular myoid cells 6.64E-9 3.54E-6 view data
SRA667709 SRS3065428 Testicle 16 Peritubular myoid cells 1.30E-15 5.62E-13 view data
SRA645804 SRS3572594 Testis 16 Peritubular myoid cells 1.04E-14 2.92E-12 view data
SRA826293 SRS4181129 Testis 1 Peritubular myoid cells 2.88E-11 1.28E-8 view data
SRA826293 SRS4181129 Testis 10 Peritubular myoid cells 6.75E-8 2.00E-5 view data
SRA784242 SRS3822686 Testicular cells 0 Peritubular myoid cells 3.44E-6 1.42E-3 view data
SRA784242 SRS3822686 Testicular cells 3 Peritubular myoid cells 4.05E-5 1.26E-2 view data
SRA784242 SRS3822686 Testicular cells 5 Peritubular myoid cells 3.89E-8 2.41E-5 view data
SRA645804 SRS2823411 Testis 14 Peritubular myoid cells 6.19E-9 1.24E-6 view data
SRA667709 SRS3065429 Testicle 9 Peritubular myoid cells 4.01E-17 1.36E-14 view data
SRA826293 SRS4181125 Testis 1 Peritubular myoid cells 5.87E-6 3.62E-3 view data
SRA826293 SRS4181125 Testis 3 Peritubular myoid cells 1.36E-7 1.68E-4 view data
SRA784242 SRS3822680 Testicular cells 1 Peritubular myoid cells 1.28E-5 4.09E-3 view data
SRA784242 SRS3822680 Testicular cells 3 Peritubular myoid cells 4.31E-6 1.72E-3 view data
SRA784242 SRS3822680 Testicular cells 6 Peritubular myoid cells 1.59E-4 3.61E-2 view data
SRA784242 SRS3822680 Testicular cells 7 Peritubular myoid cells 1.15E-20 1.84E-17 view data
SRA667709 SRS3065427 Testicle 1 Peritubular myoid cells 5.05E-9 9.52E-7 view data
SRA667709 SRS3065427 Testicle 6 Peritubular myoid cells 2.67E-18 1.07E-15 view data
SRA784242 SRS3822682 Testicular cells 0 Peritubular myoid cells 4.04E-6 1.98E-3 view data
SRA784242 SRS3822682 Testicular cells 3 Peritubular myoid cells 5.03E-5 1.64E-2 view data
SRA784242 SRS3822682 Testicular cells 5 Peritubular myoid cells 1.03E-5 4.04E-3 view data
SRA784242 SRS3822682 Testicular cells 6 Peritubular myoid cells 4.87E-27 9.53E-24 view data
SRA667709 SRS3065426 Testicle 3 Peritubular myoid cells 8.52E-6 1.14E-3 view data
SRA667709 SRS3065426 Testicle 5 Peritubular myoid cells 1.63E-10 6.53E-8 view data
SRA667709 SRS3065426 Testicle 13 Peritubular myoid cells 5.07E-4 4.51E-2 view data
SRA826293 SRS4181124 Testis 0 Peritubular myoid cells 1.22E-4 4.36E-2 view data
SRA826293 SRS4181124 Testis 2 Peritubular myoid cells 1.88E-4 4.87E-2 view data
SRA826293 SRS4181124 Testis 3 Peritubular myoid cells 1.05E-5 9.31E-3 view data
SRA645804 SRS2823410 Testis 14 Peritubular myoid cells 3.51E-13 7.92E-11 view data
SRA645804 SRS2823410 Testis 18 Peritubular myoid cells 4.85E-4 3.57E-2 view data