Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Description: A cytotoxic T cell is a T lymphocyte that kills cancer cells, infected cells (particularly with viruses), or cells that are damaged in other ways.
Synonym(s): cytotoxic T lymphocyte, T-killer cell, cytolytic T cell, CD8+ T-cell or killer T cell

Gene expression markers for T cytotoxic cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
7
Mm Hs TRAC 0.042 1 0 0.131 0 3 T cytotoxic cells Mesoderm Immune system T cell receptor alpha constant Yflag
5
Mm Hs CD8A 0.01 0 0 0.016 0.009 6 T cytotoxic cells Mesoderm Immune system CD8 CD8a molecule Yflag
4
Mm Hs GZMB 0.017 1 0 0.06 0.008 7 T cytotoxic cells Mesoderm Immune system CCPI,CGL-1,CSP-B,CGL1,CTSGL1,SECT,CSPB granzyme B flag
1
Mm Hs CD2 0.04 1 0 0.093 0.03 9 T cytotoxic cells Mesoderm Immune system CD2 molecule flag
0
Mm Hs CD27 0.018 0 0 0.023 0.016 7 T cytotoxic cells Mesoderm Immune system S152,Tp55,TNFRSF7 CD27 molecule Yflag
0
Mm Hs CD5 0.004 0.5 0 0.004 0.004 4 T cytotoxic cells Mesoderm Immune system CD5 molecule flag
0
Mm Hs CD69 0.024 0.5 0 0.111 0.007 11 T cytotoxic cells Mesoderm Immune system CLEC2C CD69 molecule flag
-2
Mm Hs CD28 0.011 0 0 0.003 0.013 6 T cytotoxic cells Mesoderm Immune system CD28 molecule flag

Datasets with computationally identified T cytotoxic cells

SRA SRS tissue cluster cell type p-value FDR View
SRA867342 SRS4550173 T cells 7 T cytotoxic cells 2.60E-4 2.07E-2 view data
SRA628550 notused Peripheral blood mononuclear cells 2 T cytotoxic cells 6.10E-8 3.14E-6 view data
SRA721637 SRS3416995 Lymph node 4 T cytotoxic cells 1.44E-5 7.42E-4 view data