Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Gene expression markers for Undefined placental cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs PRSS8 0.009 0 0.333 0 0.011 1 Undefined placental cells Trophoblast Placenta serine protease 8 flag
0
Mm Hs KRT23 0.014 1 0 0.056 0.006 3 Undefined placental cells Trophoblast Placenta K23,DKFZP434G032,HAIK1,CK23,MGC26158 keratin 23 flag
0
Mm TPBPA 0.001 NA NA NA NA 1 Undefined placental cells Trophoblast Placenta trophoblast specific protein alpha flag
0
Mm Hs TFRC 0.042 0.5 0 0.061 0 4 Undefined placental cells Trophoblast Placenta CD71,TFR1,p90 transferrin receptor Yflag
0
Mm TEX19.1 0.007 NA NA NA NA 2 Undefined placental cells Trophoblast Placenta testis expressed gene 19.1 flag
0
Mm SERPINB9G 0 NA NA NA NA 1 Undefined placental cells Trophoblast Placenta serine (or cysteine) peptidase inhibitor, clade B, member 9g flag
0
Mm SERPINB9E 0 NA NA NA NA 1 Undefined placental cells Trophoblast Placenta serine (or cysteine) peptidase inhibitor, clade B, member 9e flag
0
Mm Hs SCT 0.011 0 0 0.012 0 2 Undefined placental cells Trophoblast Placenta secretin flag
0
Mm RHOX9 0.002 NA NA NA NA 1 Undefined placental cells Trophoblast Placenta reproductive homeobox 9 flag
0
Mm RHOX6 0.004 NA NA NA NA 1 Undefined placental cells Trophoblast Placenta reproductive homeobox 6 flag
0
Mm RHOX5 0.013 NA NA NA NA 1 Undefined placental cells Trophoblast Placenta reproductive homeobox 5 flag
0
Mm Hs BATF3 0.008 0 0.208 0.009 0.007 3 Undefined placental cells Trophoblast Placenta JUNDM1,SNFT basic leucine zipper ATF-like transcription factor 3 flag
0
Mm PRL3B1 0.001 0 0.333 0 0.001 1 Undefined placental cells Trophoblast Placenta prolactin family 3, subfamily b, member 1 flag
0
Mm Hs PHLDA2 0.033 1 0.417 0.139 0.006 2 Undefined placental cells Trophoblast Placenta IPL,BWR1C,HLDA2,TSSC3 pleckstrin homology like domain family A member 2 flag
0
Mm Hs MBNL3 0.006 0.75 0.375 0.006 0.006 1 Undefined placental cells Trophoblast Placenta CHCR,FLJ11316,MBLX39,MBXL muscleblind like splicing regulator 3 flag
0
Mm Hs LDOC1 0.005 0 0.458 0.018 0 1 Undefined placental cells Trophoblast Placenta Mar7,Mart7,SIRH7,RTL7,BCUR1 LDOC1, regulator of NFKB signaling flag
0
Mm Hs LAS1L 0.025 0 0.375 0.01 0.027 1 Undefined placental cells Trophoblast Placenta FLJ12525 LAS1 like, ribosome biogenesis factor flag
0
Mm Hs H19 0.061 0 0.833 0.029 0.069 1 Undefined placental cells Trophoblast Placenta D11S813E,ASM1,NCRNA00008,LINC00008 H19, imprinted maternally expressed transcript Yflag
0
Mm FTHL17A 0.001 0 0.375 0 0.001 1 Undefined placental cells Trophoblast Placenta ferritin, heavy polypeptide-like 17, member A flag
0
Mm Hs DUSP9 0.014 1 0.75 0.007 0.014 1 Undefined placental cells Trophoblast Placenta MKP-4,MKP4 dual specificity phosphatase 9 flag
0
Mm Hs DKKL1 0.019 0 0.5 0.035 0.016 2 Undefined placental cells Trophoblast Placenta SGY-1,CT34 dickkopf like acrosomal protein 1 flag
0
Mm Hs DIO3 0 0 0.042 0 0 1 Undefined placental cells Trophoblast Placenta TXDI3 iodothyronine deiodinase 3 flag

Datasets with computationally identified Undefined placental cells

SRA SRS tissue cluster cell type p-value FDR View
SRA711739 SRS3344658 Embryonic fibroblasts 4 Undefined placental cells 2.33E-6 1.44E-3 view data
SRA711739 SRS3344658 Embryonic fibroblasts 7 Undefined placental cells 5.12E-15 1.27E-11 view data
SRA711739 SRS3344658 Embryonic fibroblasts 11 Undefined placental cells 1.70E-6 1.40E-3 view data
SRA782908 SRS3815597 Placenta 9 Undefined placental cells 3.96E-5 2.82E-2 view data
SRA638923 SRS2797119 Trophoblast 11 Undefined placental cells 2.16E-8 4.54E-5 view data
SRA638923 SRS2797055 Embryo 2 Undefined placental cells 2.54E-6 1.57E-3 view data
SRA638923 SRS2797055 Embryo 4 Undefined placental cells 2.31E-7 2.84E-4 view data
SRA782908 SRS3815600 Placenta 5 Undefined placental cells 1.69E-5 3.05E-3 view data
SRA782908 SRS3815600 Placenta 12 Undefined placental cells 2.54E-6 6.79E-4 view data
SRA782908 SRS3815600 Placenta 14 Undefined placental cells 5.04E-4 4.58E-2 view data
SRA815737 SRS4087862 Embryo 0 Undefined placental cells 2.70E-5 9.50E-3 view data
SRA815737 SRS4087862 Embryo 6 Undefined placental cells 8.76E-7 8.83E-4 view data
SRA711739 SRS3344657 Embryonic fibroblasts 4 Undefined placental cells 2.23E-7 2.96E-4 view data
SRA711739 SRS3344657 Embryonic fibroblasts 7 Undefined placental cells 1.00E-9 2.66E-6 view data
SRA638923 SRS2797062 Fetal gonad 3 Undefined placental cells 2.64E-5 2.24E-2 view data
SRA711739 SRS3344660 Embryonic fibroblasts 5 Undefined placental cells 2.22E-6 2.11E-3 view data
SRA711739 SRS3344660 Embryonic fibroblasts 10 Undefined placental cells 3.17E-6 2.26E-3 view data
SRA711739 SRS3344660 Embryonic fibroblasts 13 Undefined placental cells 6.85E-10 1.95E-6 view data
SRA711739 SRS3344661 Embryonic fibroblasts 7 Undefined placental cells 2.41E-6 2.36E-3 view data
SRA638923 SRS2797110 Placenta 0 Undefined placental cells 6.91E-11 2.88E-8 view data
SRA638923 SRS2797110 Placenta 1 Undefined placental cells 3.08E-12 2.15E-9 view data
SRA638923 SRS2797110 Placenta 2 Undefined placental cells 1.15E-13 1.21E-10 view data
SRA638923 SRS2797110 Placenta 3 Undefined placental cells 1.35E-26 2.81E-23 view data
SRA638923 SRS2797110 Placenta 4 Undefined placental cells 5.82E-8 2.03E-5 view data
SRA638923 SRS2797110 Placenta 9 Undefined placental cells 6.89E-12 3.60E-9 view data
SRA638923 SRS2797109 Placenta 3 Undefined placental cells 9.70E-8 5.91E-5 view data
SRA638923 SRS2797109 Placenta 5 Undefined placental cells 3.86E-14 4.71E-11 view data
SRA638923 SRS2797054 Embryo 8 Undefined placental cells 2.48E-7 3.98E-4 view data
SRA815737 SRS4087863 Embryo 2 Undefined placental cells 1.38E-4 3.42E-2 view data
SRA815737 SRS4087863 Embryo 3 Undefined placental cells 4.75E-6 1.96E-3 view data
SRA815737 SRS4087863 Embryo 9 Undefined placental cells 7.14E-8 8.85E-5 view data