Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Gene expression markers for Urothelial cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
0
Mm Hs UPK1B 0.001 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder TSPAN20,UPK1 uroplakin 1B flag
0
Mm Hs PIEZO1 0.01 0 0.25 0.016 0.008 3 Urothelial cells Mesoderm Urinary bladder KIAA0233,FAM38A piezo type mechanosensitive ion channel component 1 Yflag
0
Mm Hs UMODL1 0 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder uromodulin like 1 flag
0
Mm Hs IVL 0.001 0 1 0 0.001 3 Urothelial cells Mesoderm Urinary bladder involucrin flag
0
Mm Hs SLC14A1 0.008 0 0 0.018 0 1 Urothelial cells Mesoderm Urinary bladder HsT1341,RACH1,RACH2,JK solute carrier family 14 member 1 (Kidd blood group) Yflag
0
Mm Hs UPK3A 0 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder UPK3 uroplakin 3A Yflag
0
Mm Hs UPK1A 0 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder TSPAN21 uroplakin 1A flag
0
Mm Hs UPK2 0 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder UPII,MGC138598 uroplakin 2 flag
0
Mm Hs UPK3B 0 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder MGC10902,UPIIIb,FLJ32198 uroplakin 3B flag
-1
Mm Hs TRPV1 0.001 0 0 0 0 2 Urothelial cells Mesoderm Urinary bladder transient receptor potential cation channel subfamily V member 1 flag
-1
Mm Hs NAT1 0 0 0 0 0 1 Urothelial cells Mesoderm Urinary bladder AAC1 N-acetyltransferase 1 flag

Datasets with computationally identified Urothelial cells

SRA SRS tissue cluster cell type p-value FDR View
SRA653146 SRS2874268 Bladder 0 Urothelial cells 1.08E-5 1.06E-3 view data
SRA653146 SRS2874268 Bladder 4 Urothelial cells 4.56E-5 2.82E-3 view data
SRA653146 SRS2874268 Bladder 7 Urothelial cells 2.97E-5 2.27E-3 view data
SRA653146 SRS2874268 Bladder 9 Urothelial cells 3.12E-6 4.08E-4 view data