Cell type gene expression markers


This is a list of gene expression markers are used to define cell types. Green rows indicate canonical markers (classical markers used to define the cell type).

Summary: 8286 associations (178 cell types, 4679 gene symbols, 29 tissues); Last updated: 27/03/2020 10:44:00 CET

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Gene expression markers for Vascular smooth muscle cells

Vote(s) Species Official gene symbol UI Sensitivity (human) Sensitivity (mouse) Specificity (human) Specificity (mouse) Marker count Cell type Germ layer Organ Aliases Product description Disease Action
6
Mm Hs ACTA2 0.035 0 1 0.019 0.039 9 Vascular smooth muscle cells Mesoderm Smooth muscle ACTSA actin, alpha 2, smooth muscle, aorta Yflag
4
Mm Hs MYH11 0.015 0 1 0.016 0.015 6 Vascular smooth muscle cells Mesoderm Smooth muscle SMMHC,SMHC myosin heavy chain 11 Yflag
1
Mm Hs PDGFRB 0.033 0 0.75 0.036 0.033 7 Vascular smooth muscle cells Mesoderm Smooth muscle JTK12,CD140b,PDGFR1,PDGFR platelet derived growth factor receptor beta Yflag
0
Mm Hs SEMA3D 0.005 0 0 0.001 0 2 Vascular smooth muscle cells Mesoderm Smooth muscle coll-2,Sema-Z2 semaphorin 3D Yflag
0
Mm Hs TBX18 0.004 0 0 0 0 5 Vascular smooth muscle cells Mesoderm Smooth muscle T-box 18 Yflag
0
Mm Hs WT1 0.01 0 0 0.023 0 10 Vascular smooth muscle cells Mesoderm Smooth muscle WIT-2,AWT1,NPHS4,GUD Wilms tumor 1 Yflag

Datasets with computationally identified Vascular smooth muscle cells

SRA SRS tissue cluster cell type p-value FDR View
SRA667466 SRS3059996 Pons 15 Vascular smooth muscle cells 1.62E-5 1.70E-3 view data
SRA667466 SRS3060059 Thalamus 14 Vascular smooth muscle cells 2.67E-5 3.78E-3 view data
SRA667466 SRS3060007 Amygdala 17 Vascular smooth muscle cells 3.66E-5 3.95E-3 view data
SRA625553 SRS2641020 Mammary epithelial cells 21 Vascular smooth muscle cells 1.89E-4 7.63E-3 view data