Bone marrow
SRA SRA322626
SRS 2289 records (too many to list)
SRR notused
Species Homo sapiens
Sample (strain, genotype, etc.)
Tumor Yes
Protocol Smart-seq2
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq Yes
Number of cells 865
Number of exp. genes 38,929 (median number of expressed genes per cell=4219)
Number of clusters 3
Tissue Bone marrow
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Bone marrow|bcr-abl status=positive|tumor stage=3_months_TKI|phenotype=Lin-CD34+CD38-|;GSM2509414: CML15_3mTKID10; Homo sapiens; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 14.2 Mb)
data download (RPKM, R sparse data object, 35.9 Mb)
Cell clustering results
Putative cell types Dendritic cells, Luminal epithelial cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.