SRA | SRA481537 |
SRS | SRS1724933 |
SRR | SRR4340030 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | drop-seq |
Instrument | Illumina HiSeq 2500 |
Full-length mRNA-seq | No |
Number of cells | 526 |
Number of exp. genes | 21,356 (median number of expressed genes per cell=1392) |
Number of clusters | 9 |
Tissue | Hypothalamus |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | source_name=normal_hypothalamus|strain background=B6D2F1 (C57BL6 female X DBA2 male)|mouse id=mouse 2|mouse status=normal|tissue=hypothalamus|;GSM2333585: B1-normal-#3-800cells; Mus musculus; RNA-Seq |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Astrocytes, Endothelial cells, Ependymal cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all |