SRA |
SRA481537 |
SRS |
SRS1724941 |
SRR |
SRR4340043,SRR4340044,SRR4340045 |
Species |
Mus musculus |
Sample (strain, genotype, etc.) |
|
Tumor |
|
Protocol |
drop-seq |
Instrument |
Illumina HiSeq 2500 |
Read length (bp) |
|
Single or paired-end |
PAIRED |
Full-length mRNA-seq |
No |
Number of cells |
1,196 |
Number of exp. genes |
22,754 (median number of expressed genes per cell=1366) |
Number of clusters |
16 |
Tissue |
Hypothalamus |
Cell line (Y/N) |
No |
Primary adult tissue (Y/N) |
Yes |
Target cell population |
|
Metadata (raw) |
source_name=food deprived_hypothalamus|strain background=B6D2F1 (C57BL6 female X DBA2 male)|mouse id=mouse 1|mouse status=food deprived|tissue=hypothalamus|;GSM2333593: B4-FD-#1-2200cells; Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
|
Putative cell types |
Astrocytes, Endothelial cells, Ependymal cells, Interneurons, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown
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|