Hypothalamus
| SRA | SRA481537 |
| SRS | SRS1724941 |
| SRR | SRR4340043,SRR4340044,SRR4340045 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | drop-seq |
| Instrument | Illumina HiSeq 2500 |
| Read length (bp) | |
| Single or paired-end | PAIRED |
| Full-length mRNA-seq | No |
| Number of cells | 1,196 |
| Number of exp. genes | 22,754 (median number of expressed genes per cell=1366) |
| Number of clusters | 9 |
| Tissue | Hypothalamus |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=food deprived_hypothalamus|strain background=B6D2F1 (C57BL6 female X DBA2 male)|mouse id=mouse 1|mouse status=food deprived|tissue=hypothalamus|;GSM2333593: B4-FD-#1-2200cells; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Count matrix (raw read counts, R sparse data object, 6.2 Mb)
Cell clustering results |
| Putative cell types | Astrocytes, Ependymal cells, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.