Small intestine
SRA SRA508949
SRS SRS1876785
SRR SRR5127948
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 473
Number of exp. genes 15,940 (median number of expressed genes per cell=2397)
Number of clusters 5
Tissue Small intestine
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=LGR5_ECD|strain=Lgr5-eGFP-IRES-CreER|tissue=small intestine|cell type=Lgr5-eGFP(+) cells|treatment=Ad LGR5 ECD|condition=Rspo LOF|
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Putative cell types Enterocytes, Paneth cells, Tuft cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.