Small intestine
SRA SRA508949
SRS SRS1876793
SRR SRR5127956
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Full-length mRNA-seq No
Number of cells 1,357
Number of exp. genes 20,696 (median number of expressed genes per cell=2930)
Number of clusters 9
Tissue Small intestine
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=LGR5_ECD|strain=Lgr5-eGFP-IRES-CreER|tissue=small intestine|cell type=Lgr5-eGFP(+) cells|treatment=Ad LGR5 ECD|condition=Rspo LOF|
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Enterocytes, Paneth cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.