SRA |
SRA526019 |
SRS |
SRS1913121 |
SRR |
SRR5164436 |
Species |
Mus musculus |
Sample (strain, genotype, etc.) |
|
Tumor |
|
Protocol |
drop-seq |
Instrument |
NextSeq 500 |
Read length (bp) |
|
Single or paired-end |
PAIRED |
Full-length mRNA-seq |
No |
Number of cells |
3,169 |
Number of exp. genes |
26,864 (median number of expressed genes per cell=1324) |
Number of clusters |
24 |
Tissue |
Arcuate-median eminence |
Cell line (Y/N) |
No |
Primary adult tissue (Y/N) |
No |
Target cell population |
|
Metadata (raw) |
source_name=Arcuate Nucleus/Median Eminence|strain=C57BL6/J|tissue=Arcuate-Median Eminence|Sex=male|average age=34|number of mice pooled=7|experimental condition=Ad lib fed chow diet|batch=Batch 1|;GSM2452122: Drop-Seq analysis of Pooled Arc-ME single-cell suspension_ad lib Chow_1; Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
|
Putative cell types |
Astrocytes, Endothelial cells, Ependymal cells, Interneurons, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown
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|