Arcuate-median eminence
| SRA | SRA526019 |
| SRS | SRS1913121 |
| SRR | SRR5164436 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | drop-seq |
| Instrument | NextSeq 500 |
| Read length (bp) | |
| Single or paired-end | PAIRED |
| Full-length mRNA-seq | No |
| Number of cells | 3,169 |
| Number of exp. genes | 26,864 (median number of expressed genes per cell=1324) |
| Number of clusters | 19 |
| Tissue | Arcuate-median eminence |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | No |
| Target cell population | |
| Metadata (raw) | source_name=Arcuate Nucleus/Median Eminence|strain=C57BL6/J|tissue=Arcuate-Median Eminence|Sex=male|average age=34|number of mice pooled=7|experimental condition=Ad lib fed chow diet|batch=Batch 1|;GSM2452122: Drop-Seq analysis of Pooled Arc-ME single-cell suspension_ad lib Chow_1; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Count matrix (raw read counts, R sparse data object, 18.9 Mb)
Cell clustering results |
| Putative cell types | Astrocytes, Endothelial cells (brain), Ependymal cells, Fibroblasts (brain), Interneurons, Macrophages, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.