Arcuate-median eminence
| SRA | SRA526019 |
| SRS | SRS1913127 |
| SRR | SRR5164442 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | drop-seq |
| Instrument | NextSeq 500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,779 |
| Number of exp. genes | 22,660 (median number of expressed genes per cell=1027) |
| Number of clusters | 18 |
| Tissue | Arcuate-median eminence |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Arcuate Nucleus/Median Eminence|strain=C57BL6/J|tissue=Arcuate-Median Eminence|Sex=male and female|average age=75|number of mice pooled=7 (4 male, 3 female)|experimental condition=24 hour fast + 2 hour refeeding|batch=Batch 5|;GSM2452128: Drop-Seq analysis of Pooled Arc-ME single-cell suspension_24 hour fast_refed_1; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Endothelial cells, Ependymal cells, Interneurons, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Tanycytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.