Cortex, hippocampus and subventricular zone
SRA SRA526435
SRS SRS1915126
SRR SRR5259337
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Full-length mRNA-seq No
Number of cells 10,006
Number of exp. genes 30,459 (median number of expressed genes per cell=2196)
Number of clusters 25
Tissue Cortex, hippocampus and subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=E18 mouse brain cells|tissue=Cortex, hippocampus and subventricular zone|developmental stage=E18|condition=Healthy|strain=C57BL/6|;GSM2453045: E18_20160930_Neurons_Sample_03; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Cajal-Retzius cells, Endothelial cells, Ependymal cells, Microglia, Pericytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.