Cortex, hippocampus and subventricular zone
SRA SRA526435
SRS SRS1915167
SRR SRR5259377
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Full-length mRNA-seq No
Number of cells 10,141
Number of exp. genes 29,200 (median number of expressed genes per cell=2040)
Number of clusters 23
Tissue Cortex, hippocampus and subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=E18 mouse brain cells|tissue=Cortex, hippocampus and subventricular zone|developmental stage=E18|condition=Healthy|strain=C57BL/6|;GSM2453085: E18_20160930_Neurons_Sample_45; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Cajal-Retzius cells, Endothelial cells, Microglia, Pericytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.