Cortex, hippocampus and subventricular zone
| SRA | SRA526435 |
| SRS | SRS1915220 |
| SRR | SRR5259438 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 4000 |
| Full-length mRNA-seq | No |
| Number of cells | 10,900 |
| Number of exp. genes | 29,068 (median number of expressed genes per cell=1844) |
| Number of clusters | 25 |
| Tissue | Cortex, hippocampus and subventricular zone |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | No |
| Target cell population | |
| Metadata (raw) | source_name=E18 mouse brain cells|tissue=Cortex, hippocampus and subventricular zone|developmental stage=E18|condition=Healthy|strain=C57BL/6|;GSM2453139: E18_20161004_Neurons_Sample_28; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Cajal-Retzius cells, Endothelial cells, Microglia, Pericytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.