Mammary gland
SRA SRA540941
SRS SRS2016485
SRR SRR5292426
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,115
Number of exp. genes 20,611 (median number of expressed genes per cell=1138)
Number of clusters 9
Tissue Mammary gland
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population epithelial cells
Metadata (raw) source_name=Mammary gland|strain=FVB/NJ|age=Adult|cell source=Total epithelium|number of cells=3302|;GSM2510617: Adult epithelial cells; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 9.1 Mb)
Cell clustering results
Putative cell types Enterocytes, Fibroblasts, Luminal epithelial cells, Myoepithelial cells, Smooth muscle cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.