Aortic leukocytes
SRA SRA550869
SRS SRS2093772
SRR SRR5407013
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 1,023
Number of exp. genes 18,276 (median number of expressed genes per cell=997)
Number of clusters 10
Tissue Aortic leukocytes
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Leukocytes|strain/background=C57BL/6J|genotype/variation=Ldlr-/-|Sex=male|tissue=aorta|cell type=leukocytes|cell marker=CD45+|treatment=11 weeks high fat, high cholesterol diet|
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Macrophages, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.