Aortic leukocytes
| SRA | SRA550869 |
| SRS | SRS2747909 |
| SRR | SRR6363507 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 2500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,090 |
| Number of exp. genes | 20,895 (median number of expressed genes per cell=1781) |
| Number of clusters | 17 |
| Tissue | Aortic leukocytes |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Leukocytes|strain/background=C57BL/6J|genotype/variation=Ldlr-/-|Sex=male|tissue=aorta|cell type=leukocytes|cell marker=CD45+|treatment=11 weeks high fat, high cholesterol diet| |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | B cells, Dendritic cells, Macrophages, Neutrophils, NK cells, Nuocytes, T cells, T memory cells list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.