Neonatal mouse stomach explants
SRA SRA555753
SRS SRS2135627
SRR SRR5461662
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 2,550
Number of exp. genes 24,103 (median number of expressed genes per cell=2937)
Number of clusters 9
Tissue Neonatal mouse stomach explants
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=B6.129P2-Trp53tm1Brn/J|isolate=M37|dev_stage=Neonatal|sex=not collected|tissue=Stomach|genotype=p53LoxP|sample_type=RNA|BioSampleModel=Model organism or animal|;scRNA-seq of mus musculus: neonatal mouse stomach explants
Gene search
Download Count matrix (raw read counts, R sparse data object, 18.5 Mb)
Cell clustering results
Putative cell types Alveolar macrophages, Enterocytes, Fibroblasts, Macrophages, Neutrophils list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.