Neonatal mouse stomach explants
SRA SRA555753
SRS SRS2135627
SRR SRR5461662
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 2,550
Number of exp. genes 24,103 (median number of expressed genes per cell=2937)
Number of clusters 9
Tissue Neonatal mouse stomach explants
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=B6.129P2-Trp53tm1Brn/J|isolate=M37|dev_stage=Neonatal|sex=not collected|tissue=Stomach|genotype=p53LoxP|sample_type=RNA|BioSampleModel=Model organism or animal|;scRNA-seq of mus musculus: neonatal mouse stomach explants
Gene search
Download Count matrix (raw read counts, R sparse data object, 18.5 Mb)
Cell clustering results
Putative cell types Alveolar macrophages, Enterocytes, Fibroblasts, Macrophages, Neutrophils list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.