Lung
SRA SRA566478
SRS 1504 records (too many to list)
SRR notused
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol Smart-seq2
Instrument Illumina HiSeq 2000
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq Yes
Number of cells 1,504
Number of exp. genes 47,977 (median number of expressed genes per cell=3191)
Number of clusters 8
Tissue Lung
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Lung|strain=C57BL/6|tissue=lung|age=adult mice 12 to 15 weeks old|genotype=Pdgfrb(BAC)eGFP|;GSM2637885: Lung single cell 1504; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 20.8 Mb)
data download (RPKM, R sparse data object, 51.9 Mb)
Cell clustering results
Putative cell types Chondrocytes, Endothelial cells, Fibroblasts, Pericytes, Pulmonary alveolar type II cells, Smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.