Cortex CA1
SRA SRA573548
SRS 6971 records (too many to list)
SRR notused
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq Yes
Number of cells 6,286
Number of exp. genes 29,662 (median number of expressed genes per cell=2121)
Number of clusters 24
Tissue Cortex CA1
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Cortex CA1|developmental stage=p60|cell type=CA1 inhibitory cells|cell class=Unknown|;GSM2663732: 10X38_2_TTTGCATGGTACGT; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
RPKM: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.