Hippocampus (24h Sham surgery)
| SRA | SRA592147 |
| SRS | SRS2384613 |
| SRR | SRR5868575 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | drop-seq |
| Instrument | Illumina HiSeq 2500 |
| Read length (bp) | |
| Single or paired-end | PAIRED |
| Full-length mRNA-seq | No |
| Number of cells | 1,258 |
| Number of exp. genes | 20,952 (median number of expressed genes per cell=956) |
| Number of clusters | 10 |
| Tissue | Hippocampus (24h Sham surgery) |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Mus musculus hippocampus 24h Sham surgery, 10 weeks|strain/background=C57BL/6|injury=Sham|tissue=hippocampus|age=10 weeks|;GSM2718318: Mouse hippocampus 24h Sham2; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Count matrix (raw read counts, R sparse data object, 7.2 Mb)
Cell clustering results |
| Putative cell types | Astrocytes, Endothelial cells (brain), Macrophages, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.