SRA |
SRA592147 |
SRS |
SRS2384613 |
SRR |
SRR5868575 |
Species |
Mus musculus |
Sample (strain, genotype, etc.) |
|
Tumor |
|
Protocol |
drop-seq |
Instrument |
Illumina HiSeq 2500 |
Read length (bp) |
|
Single or paired-end |
PAIRED |
Full-length mRNA-seq |
No |
Number of cells |
1,258 |
Number of exp. genes |
20,952 (median number of expressed genes per cell=956) |
Number of clusters |
14 |
Tissue |
Hippocampus (24h Sham surgery) |
Cell line (Y/N) |
No |
Primary adult tissue (Y/N) |
Yes |
Target cell population |
|
Metadata (raw) |
source_name=Mus musculus hippocampus 24h Sham surgery, 10 weeks|strain/background=C57BL/6|injury=Sham|tissue=hippocampus|age=10 weeks|;GSM2718318: Mouse hippocampus 24h Sham2; Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
|
Putative cell types |
Astrocytes, Endothelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown
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|