Hippocampus (injury)
SRA SRA592147
SRS SRS2384616
SRR SRR5868577
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol drop-seq
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 492
Number of exp. genes 19,374 (median number of expressed genes per cell=951)
Number of clusters 7
Tissue Hippocampus (injury)
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Mus musculus hippocampus 24h 1.7atm TBI, 10 weeks|strain/background=C57BL/6|injury=1.7atm TBI|tissue=hippocampus|age=10 weeks|;GSM2718320: Mouse hippocampus 24h TBI1; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Choroid plexus cells, Endothelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.