Hippocampus (injury)
SRA SRA592147
SRS SRS2384617
SRR SRR5868579
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol drop-seq
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 1,178
Number of exp. genes 21,769 (median number of expressed genes per cell=1018)
Number of clusters 15
Tissue Hippocampus (injury)
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Mus musculus hippocampus 24h 1.7atm TBI, 10 weeks|strain/background=C57BL/6|injury=1.7atm TBI|tissue=hippocampus|age=10 weeks|;GSM2718322: Mouse hippocampus 24h TBI3; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Cajal-Retzius cells, Endothelial cells, Ependymal cells, Macrophages, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.