Hippocampus (injury)
| SRA | SRA592147 |
| SRS | SRS2384617 |
| SRR | SRR5868579 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | drop-seq |
| Instrument | Illumina HiSeq 2500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,178 |
| Number of exp. genes | 21,769 (median number of expressed genes per cell=1018) |
| Number of clusters | 15 |
| Tissue | Hippocampus (injury) |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Mus musculus hippocampus 24h 1.7atm TBI, 10 weeks|strain/background=C57BL/6|injury=1.7atm TBI|tissue=hippocampus|age=10 weeks|;GSM2718322: Mouse hippocampus 24h TBI3; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Astrocytes, Cajal-Retzius cells, Endothelial cells, Ependymal cells, Macrophages, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.