SRA | SRA609165 |
SRS | SRS2523513 |
SRR | SRR6049398 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | drop-seq |
Instrument | NextSeq 500 |
Full-length mRNA-seq | No |
Number of cells | 1,509 |
Number of exp. genes | 22,704 (median number of expressed genes per cell=1005) |
Number of clusters | 12 |
Tissue | Medial amygdala |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | source_name=Medial amygdala|strain=C57BL/6J|age=9 weeks|Sex=male|treatment group=acutely stressed by immobilization|tissue=Medial amygdala (MeA)|single-cell dissociation method=Act-Seq|;GSM2787219: Sample11_MeA_IM_2; Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Astrocytes, Endothelial cells, Microglia, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Unknown list all |