Medial amygdala
SRA SRA609165
SRS SRS2523516
SRR SRR6049402
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,085
Number of exp. genes 21,207 (median number of expressed genes per cell=910)
Number of clusters 6
Tissue Medial amygdala
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Medial amygdala|strain=C57BL/6J|age=9 weeks|Sex=male|tissue=Medial amygdala (MeA)|single-cell dissociation method=Act-Seq|;GSM2787223: Sample15_MeA_O_2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 7.4 Mb)
Cell clustering results
Putative cell types Astrocytes, Endothelial cells (brain), Microglia, Oligodendrocyte progenitor cells, Oligodendrocytes list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.