SRA |
SRA609165 |
SRS |
SRS2523520 |
SRR |
SRR6049406 |
Species |
Mus musculus |
Sample (strain, genotype, etc.) |
C57BL/6J |
Tumor |
|
Protocol |
drop-seq |
Instrument |
NextSeq 500 |
Read length (bp) |
|
Single or paired-end |
PAIRED |
Full-length mRNA-seq |
No |
Number of cells |
1,134 |
Number of exp. genes |
23,529 (median number of expressed genes per cell=1057) |
Number of clusters |
13 |
Tissue |
Medial amygdala |
Cell line (Y/N) |
No |
Primary adult tissue (Y/N) |
Yes |
Target cell population |
|
Metadata (raw) |
source_name=Medial amygdala|strain=C57BL/6J|age=8 weeks|Sex=male|treatment group=seizure-affected mice|tissue=Medial amygdala (MeA)|single-cell dissociation method=Conventional|;GSM2787227: Sample19_MeA_SZ_C; Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
|
Putative cell types |
Astrocytes, Endothelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Smooth muscle cells
list all
|