Caudal ganglionic eminence
SRA SRA609268
SRS SRS2523775
SRR SRR6049682
Species Mus musculus
Sample (strain, genotype, etc.) wild type Swiss Webster
Protocol drop-seq
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,405
Number of exp. genes 23,026 (median number of expressed genes per cell=936)
Number of clusters 4
Tissue Caudal ganglionic eminence
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Caudal ganglionic eminence|strain=wild type Swiss Webster|age=E14.5|library cell barcode bases=1-12|library molecular barcode bases=13-20|;GSM2787340: CGE_1; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 16.7 Mb)
Cell clustering results
Putative cell types Endothelial cells (brain), Epithelial cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.