SRA SRA611634
SRS SRS2532205
SRR SRR6060875
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 3,153
Number of exp. genes 26,565 (median number of expressed genes per cell=1688)
Number of clusters 12
Tissue Lung
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=SMA+TdTomato+ cells from normal SMA-GFP;Tbx4cre;RosaTdTomato mice|tissue=mouse lung|;GSM2790885: d0_SMA+Tm+; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 13.5 Mb)
Cell clustering results
Putative cell types Alveolar macrophages, B cells, Endothelial cells, Enterocytes, Fibroblasts, Mesothelial cells, Pericytes, Smooth muscle cells, T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.