SRA SRA611634
SRS SRS2532209
SRR SRR6060879
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,981
Number of exp. genes 24,746 (median number of expressed genes per cell=992)
Number of clusters 12
Tissue Lung
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=SMA-TdTomato+ cells from bleomycin treated d21 SMA-GFP;Tbx4cre;RosaTdTomato mice|tissue=mouse lung|;GSM2790889: d21_SMA-TM+; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 6.7 Mb)
Cell clustering results
Putative cell types Alveolar macrophages, B cells, Enterocytes, Loop of Henle cells, Macrophages, Neutrophils, NK cells, Pulmonary alveolar type II cells, Red pulp macrophages, T cells, T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.