SRA SRA611700
SRS SRS2532370
SRR SRR6061128
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 8,574
Number of exp. genes 29,691 (median number of expressed genes per cell=1979)
Number of clusters 17
Tissue Subcortex
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Subcortex|strain=Dlx6a-Cre; RCEloxP|mouse stage=E18.5|library cell barcode bases=1-16|library molecular barcode bases=17-25|
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Putative cell types Immature neurons, Neural stem/precursor cells, Neuroendocrine cells, Oligodendrocyte progenitor cells, Retinal ganglion cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.