SRA SRA611700
SRS SRS2532371
SRR SRR6061129
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 6,590
Number of exp. genes 29,593 (median number of expressed genes per cell=1299)
Number of clusters 29
Tissue Cortex
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Cortex|strain=Dlx6a-Cre; RCEloxP|mouse stage=P10|library cell barcode bases=1-16|library molecular barcode bases=17-25|
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Endothelial cells, Interneurons, Microglia, Neural stem/precursor cells, Neuroendocrine cells, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.