SRA SRA611700
SRS SRS2532373
SRR SRR6061130
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 4,368
Number of exp. genes 25,198 (median number of expressed genes per cell=895)
Number of clusters 11
Tissue Subcortex
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Subcortex|strain=Dlx6a-Cre; RCEloxP|mouse stage=P10|library cell barcode bases=1-16|library molecular barcode bases=17-25|
Gene search
Download Count matrix (raw read counts, R sparse data object, 60.1 Mb)
Cell clustering results
Putative cell types Ependymal cells, Neuroendocrine cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.