Para-aortic lymph nodes
SRA SRA628029
SRS SRS2658204
SRR SRR6252306
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,436
Number of exp. genes 23,732 (median number of expressed genes per cell=1429)
Number of clusters 7
Tissue Para-aortic lymph nodes
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=pLN-SPF|cell type=skin-draining pLNs (inguinal and axillary)|antibody=CD24- CD45-|index_id=SI-GA-A4|index_seq=TATGATTC,CCCACAGT,ATGCTGAA,GGATGCCG|;GSM2838916: L1700566; Mus musculus; OTHER
Gene search
Download Count matrix (raw read counts, R sparse data object, 27.9 Mb)
Cell clustering results
Putative cell types Endothelial cells, Fibroblasts, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.