Mesenteric lymph nodes
SRA SRA628029
SRS SRS2658205
SRR SRR6252307
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Full-length mRNA-seq No
Number of cells 3,102
Number of exp. genes 24,495 (median number of expressed genes per cell=1629)
Number of clusters 15
Tissue Mesenteric lymph nodes
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=mLN-SPF|cell type=mLNs (small intestinal and colon/caecum-draining)|antibody=CD24- CD45-|index_id=SI-GA-A5|index_seq=CTAGGTGA,TCGTTCAG,AGCCAATT,GATACGCC|;GSM2838917: L1700567; Mus musculus; OTHER
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Endothelial cells, Fibroblasts, Mesothelial cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.