Para-aortic lymph nodes
SRA SRA628029
SRS SRS3348010
SRR SRR7227541
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,760
Number of exp. genes 25,041 (median number of expressed genes per cell=2013)
Number of clusters 9
Tissue Para-aortic lymph nodes
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=pLN-SPF|cell type=skin-draining pLNs (inguinal and axillary)|antibody=CD24- CD45-|index id=SI-GA-B5|index seq=AATAATGG,CCAGGGCA,TGCCTCAT,GTGTCATC|;GSM3162136: B5; Mus musculus; OTHER
Gene search
Download Count matrix (raw read counts, R sparse data object, 33.2 Mb)
Cell clustering results
Putative cell types Endothelial cells, Fibroblasts list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.