Intestinal organoid epithelial cells
| SRA | SRA628138 |
| SRS | SRS2659230 |
| SRR | SRR6253549 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | NextSeq 500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,200 |
| Number of exp. genes | 21,273 (median number of expressed genes per cell=2510) |
| Number of clusters | 12 |
| Tissue | Intestinal organoid epithelial cells |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | No |
| Target cell population | |
| Metadata (raw) | source_name=Intestinal organoid epithelial cells|strain=C57BL/6|treatment=co-cultured with in vitro-differentiated Th17 cells|genotype=Wild-type|;GSM2839425: CytoOrgs_Th17; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Cholangiocytes, Enterocytes, Goblet cells, Paneth cells, T memory cells list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.